Rhododendron vialii: 131298062
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Entry
131298062 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Pathway
rvl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131298062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131298062
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131298062
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131298062
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Agenet
Sina_RING
Sina_ZnF
PCB_OB
zf-H2C2_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
131298062
NCBI-ProteinID:
XP_058179322
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All DBs
Position
8a:complement(8380473..8384806)
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AA seq
461 aa
AA seq
DB search
MVWGKQQQMSPTRRNVGGVEHLVFGTGSQVEVYGNDVMGLKGPWYVATIIEIDHSTPSSS
SATSTKKKRKTECSRKPLRYLVQYATVEDDEDNEMPKKPLREFLEGDYLRPLPPPTENQH
AYELKDVVDAYHRDGWWPGVVVKVADGGLKFVVSFEDPPGEFEFSRSELRVHLDWVDCRW
VRATGKDKREQASPKLIDRSEGDCSSTIAAGDPSNFLTLTDPDLLDCPICFENLTIPVFQ
CLNGHLACSSCCIKVRNKCPSCSSTIGRNGCRPIEKIIESVKTSCQNQKYGCTEMVFCCK
KRDHEDMCIYAPCSCPLTGCDFVGSSKNLSLHLSTKHSGSAKCFCYDCSISISLELQQKS
VILQEEHDGTVFVLNNGVQNLGNVIDVICIAPSSSERGFPYDLLATNGGRSVKLQSFAEH
VCGRVDHTPKSFLVVPSDFFGSRGQLKLELRISRSPGVVHA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggtatggggaaagcagcagcaaatgtcccccacgcgtagaaatgtcggcggcgtcgag
cacctcgtcttcggaacaggctcccaggtcgaagtctacggcaacgacgtcatgggttta
aaaggcccctggtacgtcgccaccatcatcgaaattgaccacagtaccccctcctcctcc
tctgccacttccaccaagaagaagaggaaaacggagtgctcgagaaagcccttgaggtac
ctcgttcagtacgccaccgttgaggacgacgaagataatgaaatgcccaaaaagcccttg
agggagttcttggaaggcgactacctgaggccgttgccgcctccgactgagaaccagcat
gcctacgagctgaaggacgtcgttgatgcctaccatagagacgggtggtggcccggcgtc
gttgttaaggtcgctgatggcggattgaagtttgtggtctcctttgaagaccctcccgga
gagttcgaattttctaggtctgagttgagggttcatctcgactgggttgattgcagatgg
gtcagggctactgggaaagacaaacgggaacaggcatcgcccaagttgatcgatcgttcc
gaaggcgactgtagttccactatagccgctggggacccttccaatttcctaaccctaact
gatccagacttgctcgattgccccatctgcttcgaaaacctaaccatccctgtctttcag
tgtttgaatggacatctagcatgctcctcttgctgtatcaaagttcgaaacaagtgtccg
tcttgctcttccactattggccgtaatggttgccggcctattgagaagataattgaatca
gtcaaaacatcatgccagaaccagaagtatgggtgcacagaaatggtgttttgctgtaag
aaacgtgatcacgaggatatgtgtatctatgcgccatgttcatgccctcttactggttgc
gactttgttgggtcttccaagaacctttccttacacctcagcaccaagcattcaggctct
gctaagtgcttctgctacgactgcagcatctcaatttccctagaactacaacagaagtct
gttatccttcaggaagaacacgatggcaccgtatttgtcctcaacaatggggttcaaaat
cttggaaacgtgatagatgtgatatgtattgcaccaagctcctcagagagagggtttcca
tatgatctcctcgcaacaaacggtggaagatcggtgaagctgcaatcttttgctgagcat
gtttgtgggcgggttgaccatactcccaagagttttcttgtggttccgagtgactttttt
ggttctcgtggacagctcaagttggaacttcgcatatcacggtcgccgggtgtagttcac
gcgtga
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