Rhododendron vialii: 131298144
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Entry
131298144 CDS
T09330
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rvl01002
]
131298144
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131298144
04121 Ubiquitin system [BR:
rvl04121
]
131298144
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131298144
Peptidases and inhibitors [BR:
rvl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131298144
Membrane trafficking [BR:
rvl04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
131298144
Ubiquitin system [BR:
rvl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131298144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
bCoV_NSP1
Motif
Other DBs
NCBI-GeneID:
131298144
NCBI-ProteinID:
XP_058179442
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All DBs
Position
8a:675538..682410
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AA seq
583 aa
AA seq
DB search
MKLEGKLDIPSLFHKFKHGLGTLPQVKWVSASGFHISLAGLLGVAGIIFALRDGKIRNFN
CLPWSSDSDGSLEKKWVVPGLQNLGNNCFLNVILQSLASCSCFQSFLQTTVEEYECLLGK
EWTDSLPLTVALASLMEELCNLQRERMALSPRKLMLVMNHYISNFNLANQQDAEEAFFHI
LSSLREEASSCYVPVYMSLANVTAIPNSRILAPKRMEEQSEHERWRQSFLGPFDGILGSI
LTCESCSFQISLDFQFFHSLHLSPVLCGGANVIMPGCSVEDCLRKFFVSERLDNYCCSHC
WHGAAIKFLSSMDECEADIGKLRLCCEHGSCDCKKLPHLEALPWSNNFSHTFKQLNIARS
PKILCIHLQRASMNEYGELVKLQGHVSFPLILNLNSFVKSGVVTKNWEENVQSFRPKQQY
QHYANHLHSQLDTNMLKGIYSKAGFIEDLGQPGFEISGGDTHSPAFQGKSNVPQSGGFSD
TVIGDAAMQSDNKVGGTFCFVPSERHMYCLVSVVEHFGRSGSGHYTVYRRAKAKNDGDDP
VGIAEPALVRWFCISDSQVHSVSEEEVLAADASVLFYERISED
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaaggaaaactcgatattccgtcattatttcacaaattcaaacatggattg
ggaactttgcctcaagtgaagtgggtttcagcttctggatttcatatatcattggctggt
ctattgggtgttgctggtattatctttgccctcagagacggtaaaattagaaattttaat
tgcttaccttggtcatcagatagtgatggttctttggagaagaagtgggtagtacctgga
ttgcaaaatcttggcaataattgtttcctaaatgtgattttacagtctctggctagctgt
tcttgctttcaaagttttcttcaaacaactgtagaggaatatgaatgtttgctgggaaag
gaatggaccgatagcttgcctcttactgttgccttggcttctttgatggaagaattatgt
aacctccaacgtgaaaggatggcactaagtccacggaaattgatgcttgtgatgaatcat
tatatttctaacttcaaccttgccaaccaacaggatgcagaggaagcgttctttcatatt
ttatcctctttacgagaagaagcttcaagttgttatgttcctgtatatatgtctctggca
aatgtgactgccattcctaatagtcgaattcttgctccaaagaggatggaggagcaaagc
gagcatgaaagatggcgacaaagtttccttgggccctttgatggaattcttggaagcatt
ttaacttgcgaaagctgttcgtttcagatctctctggattttcaatttttccatagctta
cacctttcaccagtgctttgtggcggtgctaacgttattatgcctggatgttctgtggag
gattgcttgaggaaattctttgtgtcagaacggctagataattattgttgcagtcactgt
tggcatggtgctgcaataaagttcttatcttcaatggatgagtgtgaggcagatattgga
aaacttaggctctgctgtgagcatggttcttgtgactgcaaaaagcttcctcaccttgaa
gcactaccatggtcaaacaacttttcacacactttcaagcaactaaatattgctcgaagt
ccgaagattctatgcattcatctacagcgtgcttcaatgaatgagtatggagagctagtt
aaacttcagggccacgtgtcttttcctctgattttaaacctgaactcattcgtgaagagt
ggggtggtgacgaagaactgggaagaaaacgtgcaaagcttccgaccaaagcaacaatat
caacattacgccaatcatttgcattcgcaacttgatacgaacatgctaaagggcatttac
tcaaaagccggatttatcgaggacttgggacaaccagggtttgaaatctcaggtggtgac
acccatagtccagcttttcaagggaaatcaaatgtgccccaaagtgggggcttctcagac
acggtaattggtgatgcagccatgcagtctgataacaaggtgggtgggactttctgtttt
gtaccttcagaacgtcacatgtactgtttagtttctgttgtggagcacttcggaaggtcg
ggaagtggtcactacactgtttaccgaagagcgaaagccaaaaacgatggagatgatcct
gttgggatagcggagcctgctcttgtacgttggttttgtatatcagattcacaagtacat
agtgtttcagaggaagaggttcttgctgcagacgctagtgtccttttctatgagagaatt
tcagaggactag
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