Rhododendron vialii: 131298471
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Entry
131298471 CDS
T09330
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rvl
Rhododendron vialii
Pathway
rvl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131298471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131298471
Ion channels [BR:
rvl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131298471
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Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
131298471
NCBI-ProteinID:
XP_058179934
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Position
8a:27302557..27309212
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AA seq
695 aa
AA seq
DB search
MNNNKIIQRYPSTSAAKLRHFPTLSLPLIYDRHRPWWNQILDPGSEFVDQWNHIFLVTCL
VALFLDPLYFFLPVIGGRVCMTIDFGLAVVITLIRSVVDLFSVLHMAMKFRTAYVAPSSR
VFGKGELVTDPKMIAIRYLKTDFLMDLAATLPLPQILFWFVIPAVKSPNAAHANHTISLM
IILQYIPRLFVIFPLNQRIIKTTGVVAKTAWAGAAYNLLLYLLAGHVLGASWYLLSIERQ
YSCWRLECRKEQNFTHSPSCNPLFLDCWNVNMPERQFWLNNTKVLTECDARDSHAFKFGM
FADAFTEDVASSNFIEKYFYCLWWGLKNLSSYGQSLNTSTYVGETLFSSLICIAGLVLFA
QLIGNMQTYLQSSTARLEEWRVKRRDTEEWMRHRQLPPDLQDRVRRFVQYKWLATRGVDE
EEILRALPLDIRRQIQRHLCLALVRRVPFFSQMDDQLLDAICERLVSSLSTKDTYIVREG
DPVNEMLFIIRGQLESSTTNGGRSGFFNSITLKPGDFCGEELLTWALMPSSSLNFPSSTR
TVRALTEVEAFALRAEDLKFVANQFKRLHSKKLQHAFRYYSHQWRTWGACYIQTAWRRLK
RKKLVEELSRQESGYGYVGGMDPDGDFEEDGGGGGSPSVDSNGQFLGATFLASKFAANTR
RGVTAQKGTSVVETGKSGLEMPKLFKPDEPDFSAD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaacaaaatcatccaacgctacccctccacctccgccgccaaattacgccac
ttccccaccctctccctccccctcatctacgaccgccacaggccctggtggaaccagatc
ctcgaccccggcagcgagttcgtcgaccaatggaaccacatcttcctcgtcacctgcctc
gtcgccctcttcctggaccctctctacttcttcctccccgtcatcggaggccgcgtctgc
atgaccatcgatttcggattggccgtcgtcatcaccctgataaggtccgtggtggacctg
ttctcggtcttgcatatggccatgaagttccggacggcctacgtggcgccgagttccagg
gtctttgggaagggggagctcgtgacggatcccaagatgattgcgattcggtacttgaaa
acggactttttgatggatcttgctgctacgctcccgctcccacagattctcttctggttt
gtaattccagcagtgaaaagccctaacgctgctcatgccaaccacaccatttccctgatg
ataatccttcaatatattccacggttgtttgttatttttccattgaaccagcggattatt
aaaacaacaggggtcgtggctaagacagcttgggcaggggcagcatacaatctcctcctc
tatctgctagcaggtcatgttttaggagcttcgtggtatctgctgtccattgagaggcag
tattcatgctggagactggaatgtagaaaggagcagaattttacacactcgccgtcttgc
aatcctttgtttctggattgctggaatgttaacatgcctgaacgccagttttggttgaac
aacactaaagttcttaccgaatgtgatgctcgtgatagtcacgcctttaagtttggaatg
tttgctgatgccttcacagaggatgttgcttcttcgaatttcatcgaaaagtacttttac
tgcctttggtggggtttgaagaatctgagttcatatgggcagagtttgaatacaagtact
tacgttggtgagacgctatttagcagtcttatttgtattgcgggtttagttttgttcgca
caactgattggcaacatgcagacctacttgcaatcttcaacggctagacttgaggaatgg
agagttaaacgaagagatacagaagaatggatgaggcaccgacaactacctccagatctt
caagatcgtgttcgccgatttgttcaatataaatggcttgctactagaggagtagacgaa
gaagaaatattgcgagcattgcccttggacatccggcgtcaaatccaaaggcatctctgc
cttgcccttgttcgccgtgttcctttcttctcccaaatggacgaccaactcctcgatgca
atatgcgagcgcctcgtctcctccctgagcaccaaagacacctacatagtccgcgaagga
gatcccgtaaacgagatgctcttcataatccgaggccagctcgagagctccaccacaaac
ggcggccgctccgggttcttcaactccatcacactcaaaccaggcgacttctgcggcgaa
gaactcctcacatgggccctaatgccttcttcaagcctcaacttcccttcctccactcgg
accgtccgagcactcaccgaagtcgaagccttcgccctccgagccgaggacctcaagttc
gtcgcgaaccagttcaagcgtctccacagcaagaagttgcagcacgcattccggtactat
tctcatcagtggaggacttggggggcgtgttatatacagacggcttggaggaggttgaag
aggaagaagttggtggaggagttgtcgagacaggagagtgggtatggatatgttggtggt
atggatccagatggggattttgaggaagacggaggaggtggggggagtccgtcggtggat
agtaacgggcagtttcttggggcgacgttcttggcctcgaaattcgctgcgaatactagg
aggggggtgaccgcacagaaggggacatcagtggtggagacgggtaagagcggcttggag
atgccgaagctgtttaaaccggatgagcctgatttctctgcagattga
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