Rhododendron vialii: 131298871
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Entry
131298871 CDS
T09330
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131298871
03036 Chromosome and associated proteins [BR:
rvl03036
]
131298871
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131298871
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131298871
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131298871
microRNA pathway
RISC loading complex
131298871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
131298871
NCBI-ProteinID:
XP_058180389
LinkDB
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Position
1a:37490329..37498209
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AA seq
905 aa
AA seq
DB search
MEKEAGGSPLSLPPRPAIKSPTVKPEKLDTPKHSIISRQGFGAAGRPISLVVNHFKASIK
CPNKSFYQYTVSITWGDNEAVLIKGLKRKVVDKLYQTYFSELAGRRYAYDGEQSLYTVGP
LHGNRLEFAVVLEESFAKRDSSSHRGNNSEYSKRSKHSFQPKIFKVEISYAAKIPLRSIS
LALQGSKAKHAQDPLRVLDTILQQQASDRGCLLVRQSFFHDDPRNFTDIGGGVTRCQGLY
SSFRATHGGLSLNMDVSATMIVTPGPVIDFLLAKQDAKKPCNIDWAKEANEMLKTMRVRT
RHTNMEFRIVGLSEMPCNQQYFSWKVKNGDGGDDGEKTVEISVYEYFAKHHKIQLTYSAD
MPCLNVSRKSTNCLPLELCNLVSFQRYTKELSPTQRASLLDKSRQEPQECIQALTNAVRN
CRFDSDPLLAACGISIEKQLTQVDGRVLEAPRLKFGKGEDCIPQNGRWNYYNKQLLNPIP
IEWWAVINFSTCCDTSHLSRELINCARNKGLHIKGPHTLIEEDPRYGSSSPVVRVEKMFE
KIVSKFPSRRPQFLLCILPERKTSDIYGPWKKICLCDKGIATQCLSPSKININGQYLTNV
ILKINAKLGGINSLLAIEIEPFLGEPPINSWVPLIKDTPTMILGMDVSHGPSGSNTPSIA
SVVGSLSWPLISRYRAAVRTQSPKVEMIESLFKPLANGGDDGIMRELLMDFYLTSAEHKP
AQIILFRDGVSESQFNQVLTGELDDIIKAYKHLGKGDIPKFTVIVAQKRHHTKLFQERGS
KNVPPGTIVDTKIVHPRSYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDQLQDFVHSLS
YIYQRSTTAISIVAPVKYAHHAAKQMGQFVNFEDSSGSPSERKGSPAAPKLPRLHKDVAR
SMFFC
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaggcaggtgggtccccactatcactgcctccacgaccagcaatcaaatca
ccaactgtgaagccagagaaactggacactcccaagcattccataatcagtaggcagggg
tttggtgctgccgggcgacccatttctttggtggtgaaccacttcaaagcttctatcaaa
tgccccaataaatcattttaccagtacactgtttctataacttggggggacaatgaagct
gttttgataaagggactgaagagaaaagttgtcgataaactttaccaaacatacttttct
gaacttgctgggagaagatatgcatatgatggagaacaaagtttgtacacagtgggccct
ttacatggaaatagattagagtttgcagtggtgctggaggagtcatttgcaaaacgtgac
agctcttctcacagagggaacaatagtgagtatagtaagaggtccaagcattcttttcag
cctaaaattttcaaggtggaaatcagttatgctgcaaaaatacccctgaggtccatttct
cttgcgctccaaggatccaaggcaaaacatgctcaagatccattgagagtgcttgacact
atattgcagcagcaagcatctgacaggggttgccttttagtgaggcagtcattctttcac
gatgacccaaggaacttcaccgacattggaggaggtgtaactcgctgtcaggggttatac
tccagctttcgtgcaactcatggtggtttgtctctaaatatggacgtatctgcaaccatg
attgttacacctggaccagtgattgacttcctgctggcgaagcaggatgctaagaaacct
tgcaacattgactgggcaaaggaagctaacgaaatgctaaaaactatgagggttcgaaca
aggcacaccaacatggaatttaggatcgtaggcttgagtgaaatgccttgcaatcagcaa
tatttttcttggaaagtaaagaatggtgatgggggagatgatggagagaagactgtggag
atttctgtgtatgaatattttgccaaacatcataaaatacaactcacgtactccgcagac
atgccatgcctgaacgtgagcaggaaaagtaccaactgtcttccactggaactttgcaac
cttgtctcttttcaacgctatacaaaggaactatctccaacacagagagcatctttactt
gacaagtcaaggcaagagccacaggaatgcatacaagctttgacgaatgctgtgagaaat
tgccgattcgacagtgatcctctcctagctgcttgtggcatttcaattgaaaaacagctt
actcaagttgatggccgtgttcttgaggcgcccaggttgaagtttggtaaaggtgaagat
tgcataccccaaaatgggcgatggaactattacaacaagcaactcttgaaccctatccca
atagaatggtgggcagtcatcaacttctctacttgttgtgatacaagtcatctttccaga
gagctcatcaattgtgcaaggaacaagggtcttcatatcaaaggtccacatacactaatt
gaggaagatccacgatacggaagctccagccctgtcgtacgagtagaaaagatgtttgaa
aagattgtttctaaatttcctagccgtcgtcctcaatttcttctttgcatcttgccagag
cgaaaaacttctgacatctacggaccttggaagaaaatatgtctgtgtgacaaaggaata
gccactcaatgtctttccccttccaagatcaacatcaatggtcaatatcttacaaatgtc
attctcaagattaatgcaaagcttggagggataaactcattgttggccatagagatagag
cctttccttggtgagcccccgataaattcttgggtgcccctaataaaagatactccaacc
atgattttggggatggacgtctctcatgggccttccggatcgaatactccatcgatagct
tcggttgttggatctctatcttggccactgatatcaaggtatcgagcagctgtacgaaca
caatcaccgaaagtggaaatgattgaatctttgtttaaaccattagcaaatggaggtgat
gatggtattatgagggaactattgatggatttctatctaactagcgcagaacacaaacca
gctcagataatcttattcagggatggagtgagcgaatcacaatttaatcaagtgttgacc
ggcgagctggatgatatcataaaggcctacaagcatctcggtaaaggtgacattcccaag
ttcacggtgattgtggctcaaaagagacaccacacaaagctatttcaagaacgtggctca
aaaaacgtacctcctggtacaattgttgacacaaaaattgtgcatccgaggagctatgat
ttttacatgtgtgctcatgcagggatgataggaacttcacggcctgcacactatcatgtc
ttgcttgatgagattggtttctctcctgatcagctgcaggatttcgtccactcgttgtca
tacatataccaaaggagcactactgcaatctcaattgttgcacctgtcaaatatgcacac
catgctgccaaacaaatggggcaattcgtcaactttgaggattcctccggatcgccttca
gaacgaaaaggaagtccagctgctcccaagcttccgagattgcacaaggatgttgcgcgt
tctatgttcttttgctga
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