Rhododendron vialii: 131299095
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Entry
131299095 CDS
T09330
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131299095
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131299095
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131299095
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131299095
Spliceosome [BR:
rvl03041
]
Common components
Common spliceosomal components
SR proteins
131299095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
131299095
NCBI-ProteinID:
XP_058180641
LinkDB
All DBs
Position
8a:complement(3097231..3116576)
Genome browser
AA seq
218 aa
AA seq
DB search
MADSPRTRSRSRSRSISRSRMRGRSRSRSRSRSRGRGRNDVNPGNTLYVTGLSTRVTERD
LEDHFSKEGKIASCFLVVEPRTRASRGFAFISMDTPDDAERCIKRLHQSVLDGRCITVER
SRRKRARTPTPGHYLGLKNTRDHGYRGDRGRYRGGRDDYEYRRSPPRRSPYRGGGRDYSP
PPRRSSPYGGGRSRRERSRSLPYSPYGSPERSYGRRSR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctcctcggacaagatccaggtcaaggtcaaggtccatatccaggtcaagg
atgaggggcaggtccaggtctagatcaagatcaaggtcaaggggtcgtggcaggaatgat
gtaaatcctggaaatacactctatgtaactgggttatctacaagggtaacggagagagac
cttgaagatcatttctccaaagagggaaagatagcctcatgttttctggttgtggagccc
cgtacacgtgcctctcgtggttttgctttcatatcaatggatactcctgatgatgctgag
cggtgcatcaaacgactccatcaatcagttcttgatggccggtgcattaccgtggagagg
tcacggaggaaacgcgccagaactcccactcctggtcactatcttgggctgaaaaatacc
agggaccatggctatcgcggagaccgtggtaggtaccgtggaggtcgcgatgactacgag
tatcgcaggtctcctcctaggcgctcaccatatcgaggtggtggtcgtgattactctcct
cctcctagacgttcttcgccatatggaggtggaaggtcaagaagggagcgatcgaggtcg
cttccttattctccgtatggtagtccagaaaggagctatggtcgccgttctaggtaa
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