Rhododendron vialii: 131299102
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Entry
131299102 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131299102 isoform X1
KO
K24755
WD repeat-containing protein 76
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131299102
03036 Chromosome and associated proteins [BR:
rvl03036
]
131299102
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131299102
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131299102
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131299102
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
131299102
DSBR (double strand breaks repair)
Other DSBR factors
Others
131299102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
131299102
NCBI-ProteinID:
XP_058180656
LinkDB
All DBs
Position
1a:5307775..5311861
Genome browser
AA seq
500 aa
AA seq
DB search
MTPRLSPYSVSRHLSFQPTSLSLSLSLSLSLFATLSLAPMAPEKLTEYERRRLENIKRND
QMLASLNIHSKINDLTESTKRQRAQTKVIPEKKPKPEISIVIRRSLRRRGMPPDASIAGG
LKKAKTPKLIPTLGPITMKDAYCGDATDQNLIETIMGVSKNSQLYSGDENENSGHPIRVS
GCIDLGSLRLEPENVARVVQGRIPMVRFFPSTDMKLVAVGSEFGHVGFWNVDARNEDGDG
IYLYQPHLGPVTGIVIHPCSLTKVYSSCYDGFLRLMDVEKEMFLLLYSSNDVIVSISQRP
NDVKSLYFAGAQGIVNMWDERAGKTLTPWALHEERINTIDFSTYNTNIMATSSSDGTACI
WDLRFVDAVKPKLLKTVSHNRAVQSAYFSPSGSYLATTGSDDKVGLVTGANFEDTSMIHY
QNSTLGGIFSIRAIWGWDDSYLFVGSVKREVHVISTARRTSIRTLRSPHISAIPSRLDAH
PCEIGMLVGATSGGYMWSTC
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacgtttatcaccttactctgtttcccgccatttatctttccagcctacatct
ctctctctctctctctctctctctctctccctctttgcaactctctcactcgctccaatg
gcgcccgagaagttaacagagtacgagcggcgtcggctcgagaacataaagcgcaacgac
caaatgctcgcttctctcaacatccattccaaaatcaacgatctcacggaatcaaccaaa
cgccaaagggcacaaaccaaggtaattccagagaaaaaaccgaagcccgaaatctcaatc
gtaatccgaaggtctctacggcgcagaggaatgccacccgatgcctccattgcaggcggc
ctaaaaaaagctaaaacccccaaattaatacctacattgggccctattaccatgaaagat
gcttattgcggtgacgccactgaccaaaacctaattgaaacaataatgggtgtttcgaag
aattcccaattgtactctggcgatgaaaatgagaattcgggtcatccgattagggtttct
ggttgcattgatttggggtcgctgaggttagaaccggagaatgtagctagggttgtgcag
gggaggataccgatggtgaggttctttccgtcaacggatatgaagttggttgcggtgggg
agtgagtttgggcatgttgggttttggaatgttgatgctagaaacgaggatggagatggg
atttatttgtaccaaccgcatttggggccagtcacggggattgtaattcatccgtgctcg
ttgacaaaggtatacagcagctgctatgatggatttcttcggttgatggatgtcgagaag
gagatgttcctcttgttatattccagcaatgatgtcatagtttccatttctcaacgacca
aatgatgttaagtccttatattttgctggggctcaaggaattgtcaatatgtgggatgag
agggctggaaaaactttaaccccatgggctttgcatgaagagagaatcaacacgatagat
ttcagcacatataacactaacatcatggcaacaagttcctcagatgggactgcttgcatt
tgggatttgagatttgttgatgcagttaagccaaaattgttgaagacagtaagccacaat
agggccgtgcaatcggcttacttttcaccttctggaagctatctagcaacaacaggttct
gatgacaaagtcggcctagtgactggagctaattttgaagacacaagtatgatacattat
caaaattcaacattaggaggtattttttcaattagagcaatatggggctgggacgattca
tacctcttcgtcggaagtgtgaagagggaagtccacgttatctccacagctaggcgaaca
agtattagaactttacggagcccccatatatctgcaattccaagtcgcttggatgcacac
ccttgcgagattgggatgcttgtgggagccacatctggcggctacatgtggtcaacatgc
taa
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