Rhododendron vialii: 131299112
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Entry
131299112 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131299112
KO
K24755
WD repeat-containing protein 76
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131299112
03036 Chromosome and associated proteins [BR:
rvl03036
]
131299112
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131299112
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131299112
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131299112
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
131299112
DSBR (double strand breaks repair)
Other DSBR factors
Others
131299112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
131299112
NCBI-ProteinID:
XP_058180672
LinkDB
All DBs
Position
1a:5313115..5318478
Genome browser
AA seq
471 aa
AA seq
DB search
MAPKKLTEYECRRLENIKRNDQMLASLNIHFKINDLTASAKRQRAQTKVIPEKKPKPETP
IVTRRSLRRRGMPPPDASTAGDLKKDDSDETLTKTPKLKPKLGPITMKDAYCGDATDQKL
AETIIGVSKNSQLGNGDENESLGYPIRVSGCVDLGAVKLEPKNIARVVPGRVLTVRFFPS
MDMKLVAVGNKFGNIGFWNVDAKEEDGDGIYLYQPHSAPVSGIVVQPCSLSKVYSSCYDG
FLRLMDVEKELFNVLYSSDDAIFSIAQRPNEVKSIYFAEGQGIVNMWDERAGKPLTPWTL
HKDRINTIDFSTDNTNIIATSSTDGSACIWDLRYVDAVEPKWLKKVSHKRAVHSAYFSPS
GSCLATTSFDDKVGLLTGANFEDLSMMHHNNQTGRWISSFRAIWGWDDSYLFIGTMSRAV
NVISTARRRSIGILESPHVSAIPCRFDAHPYKIGMLAGATSGGQVYMWTTD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagaaattaacagagtacgagtgccgacggctcgagaacatcaagcgcaac
gaccaaatgctcgcttctctcaacatccattttaaaatcaacgatctcacagcatcagcc
aaacgccaaagagcacaaaccaaggtaattccagagaagaaaccaaaacccgaaacccca
atcgtaacccgaaggtctctacggagaagaggaatgccaccacccgatgcctccactgca
ggagacctaaaaaaagacgattcagacgaaaccctaactaaaacccccaaattaaaacct
aaattgggccctattaccatgaaagatgcttattgcggagacgccactgaccaaaaacta
gctgaaacaattatcggtgtttcgaagaattcccaattgggcaatggtgatgaaaatgag
agtttgggttatccgattagggtttcgggttgcgttgatttgggagcagtgaaattggaa
ccgaagaatatagccagggttgtgccggggagagtactgacggtgaggttctttccgtcg
atggatatgaagttggtagctgtggggaacaagtttgggaacattggattttggaatgtt
gatgctaaggaggaggatggagatgggatttatttgtaccaacctcattcggcgccggtc
tcagggattgtagttcaaccatgttcattgtcaaaggtatatagcagctgctatgatgga
tttcttcggttgatggatgttgagaaggagctgttcaatgtgttgtattccagtgatgat
gctatattttccattgctcaacgaccgaatgaggttaagtccatatattttgccgagggt
caaggaattgtcaatatgtgggatgagagggctggaaaacctttaaccccatggacttta
cataaagataggatcaacacaatagatttcagcacagataacactaacatcattgcaaca
agttccacagatggcagtgcttgcatttgggatttgagatatgttgatgcagttgagcca
aagtggttgaagaaggtaagccacaaaagggctgtgcattctgcttacttttcaccttct
ggaagctgtctagcaacaacgagttttgatgacaaagtcggcttactgactggagctaat
tttgaagatttgagtatgatgcatcataataaccagacgggaagatggatttcttcattc
agagcaatatggggctgggatgattcatacctcttcatcggcactatgagcagagcagtc
aatgttatctccacagctaggagaagaagtattggaattttggagagcccccatgtctct
gcaattccatgtcgctttgatgcacacccttacaagattgggatgcttgcgggtgccaca
agtggcggccaggtttacatgtggacaacagactaa
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