KEGG   Rhododendron vialii: 131299179
Entry
131299179         CDS       T09330                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rvl03036]
    131299179
Enzymes [BR:rvl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131299179
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     131299179
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131299179
NCBI-ProteinID: XP_058180769
LinkDB
Position
8a:complement(23689069..23699653)
AA seq 659 aa
MEKMELKSEDNKGENRRRRRVGLIHDERMCKHFAPDDDYHPENPNRILAIWNKLKSSGIT
QRCVVLSAKEAEDKYIAAVHTKNHIDLIKNISSEKFDSRRERIAAKYNSIYFNEGSSEAA
YLAAGSVLEVAEKVAKGELDSAFAIVRPPGHHAEENEPMGFCLHNNVAVATSFLLNKREL
GIKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRYDFGTFYPASEDGSHIMIGKGPGAG
YNINVPWESGRCGDADYIAAWDHVLIPVAKEFNPDIIMISAGFDAAVGDPLGGCRVTPYG
YSVMLKKLMESAQGKIVMALEGGYNLDSIANSVLACVEVLVEEKPLSGSSEAYPFESTWR
VIQAVREKLSPFWPILKYELSKKLTDGKAPPIQISCSDSDGENDICANIVSEDLEKAVQD
VLQPFSELRVGINSNDEVSTVSAPWRLELSKIDVWYATFGSNMCKSRFLCYIQGGQVEGM
IKACAGSLDKSPPKEILWKTVPHRLFFGHDQSKAWGPGGVAFLHPESNSQNRAYMCLYRI
TLEQFNDVLLQENVSRIDLSSPAFDLTDLDSIMEKGKSVEVLERGWYRNVVHLGNESGIP
ILTMTCTLSDVESFTSGILPLCAPAKEYADTLVRGLVGGNQFSEEEAMAYILEASTNPL
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggaaaaaatggagctcaaatcggaagataacaaaggtgagaatcgacggcgccggcgc
gtggggctcatacacgacgagagaatgtgcaagcatttcgctcccgacgacgattaccat
cccgaaaaccccaatcgcatccttgccatctggaacaagctcaaatcctcaggcatcacc
caaagatgtgtggttctgagtgccaaagaagcagaagataaatatatagctgcagttcac
accaagaaccacattgatttaatcaagaacataagctccgagaaattcgattcacgaaga
gagaggattgctgcaaaatataactcaatatatttcaatgaaggctcctcagaagctgca
tatcttgctgctggctctgttttagaggtcgcggagaaagttgctaaaggagaattggat
tcagcttttgctattgttaggcctccaggtcatcatgcagaagaaaatgaaccaatgggg
ttttgtctacacaacaatgttgctgtagctacaagtttcctcttgaacaaaagagagttg
ggtatcaagaaaatcttgatagttgattgggatgttcatcatggaaatggtactcagaaa
atgttttggaaggatcctcgagtattgttcttctcagttcacaggtacgacttcgggact
ttttatccagctagtgaggatggttcacatattatgattggcaaaggaccaggtgcaggg
tacaacatcaatgttccctgggagagtggtcggtgtggggatgctgactatatagcagct
tgggaccatgtattaattcccgttgctaaggaatttaatccagacataataatgatttct
gctggatttgatgcagctgttggtgatcctcttgggggttgtcgcgttacgccatatggg
tactctgttatgttgaaaaagctgatggagtctgctcagggtaagattgttatggcatta
gaaggaggatacaatcttgattctatagcgaattcagttctagcgtgtgtagaagtattg
gtagaggagaagcctctcagtggttcttcagaggcatatccatttgagtccacatggcga
gtaatacaagcggtccgtgaaaaactgagtccattttggccgatactaaagtatgaatta
tcaaagaaattaactgatggaaaagcacctccaattcagatctcatgctcagattctgat
ggtgagaatgatatttgtgcaaatattgtatccgaagatcttgagaaggctgttcaggac
gttttgcaacccttttctgagctgagagttggtattaatagtaacgatgaggtaagtaca
gtttctgccccctggagattagagctttcaaagattgatgtttggtatgctacatttggg
tcaaatatgtgtaaatcaagattcctctgctacattcaaggtggacaggtggaaggcatg
ataaaagcatgtgctggttcactggataaaagcccaccaaaagagattttgtggaagaca
gtccctcatcgtttattctttggtcatgatcaaagtaaagcttggggtcctggaggggtt
gctttcctgcatcccgaaagtaactctcaaaatagagcttacatgtgcctgtacagaatc
acgcttgagcagttcaatgatgttttgcttcaggaaaatgtttcaagaattgacctgagt
tctcctgcgtttgatttgactgacttagactccatcatggagaaggggaagtctgtggag
gtcttggagagaggctggtaccgtaacgtcgtacacctgggaaatgaaagtggcattccg
atattgacaatgacgtgcaccctgtctgatgtcgaaagcttcacatctggtatacttccc
ttatgtgcccctgccaaagaatatgccgataccttggtgagaggcctggtcggaggaaat
cagttttcagaggaggaagctatggcttacattctggaagcttcaacaaatccattgtga

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