Rhododendron vialii: 131299225
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Entry
131299225 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131299225
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
rvl
Rhododendron vialii
Pathway
rvl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131299225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131299225
Membrane trafficking [BR:
rvl04131
]
SNARE
SNAP-25[C] (Qc)
Use1
131299225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Use1
BORCS6
Snapin_Pallidin
Phage_Mu_Gp27
FapA
PLCB1-4-like_EFh
Motif
Other DBs
NCBI-GeneID:
131299225
NCBI-ProteinID:
XP_058180838
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Position
1a:complement(5404568..5410225)
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AA seq
240 aa
AA seq
DB search
MGISKIEINLRRLLAAAPHQQNQAKLLHYVATLREQLEELAEEKTSDGLPRISKAQLNDY
SEKIEAIASKLAVPVSTMQESEKPSDITPIGESPSKTKGESPILTSPKLRRRFVPQSNVE
DRPHNHADTNNSAPVKLDAAAQTHIQKHRKLQEDLTDEMVGLAQQLKESSLVMSQSIKNT
EKILDSTEEAVEHSLASTGRVNTRAMDINSKTFKTTCFTWLVMFVMTCIFIMVVLLIRVT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcagcaaaatagaaataaacttaaggagactgctcgcggctgcacctcatcaa
caaaatcaagcaaagcttctacattatgttgctactttaagggaacaattggaagaacta
gctgaagagaaaacctcagatggattaccaaggatatcgaaagcgcagttgaatgattat
tcggagaagatagaagccattgcttcgaagttggctgtccccgtgtcaaccatgcaagaa
tctgagaaaccttctgatataactcctataggagaaagcccttctaagaccaaaggagaa
agtccaattcttacttccccaaaattgaggagaagatttgtgccccaatcgaacgttgaa
gatagacctcataatcatgctgacactaataactcggctcctgtcaaattggatgcagca
gcacagactcatattcaaaagcacagaaagcttcaagaggacttgacagatgaaatggtg
gggttggcacagcagcttaaagagagtagtctcgtcatgagtcaatccatcaaaaacact
gagaaaattcttgattcgacagaggaggccgttgaacatagcttggctagcactggtcgt
gtcaatacacgagcgatggatataaactcgaagacattcaagactacgtgttttacatgg
cttgtgatgtttgtaatgacatgtatcttcatcatggttgtacttcttattcgtgtcacc
tag
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