KEGG   Rhododendron vialii: 131299226
Entry
131299226         CDS       T09330                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rvl03036]
    131299226
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131299226
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    131299226
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     131299226
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 131299226
NCBI-ProteinID: XP_058180836
LinkDB
Position
8a:complement(33556536..33570971)
AA seq 1155 aa
MADSIHWIKHVESYVDSSGSPSQQVASLDAIAALLKNDMLKIEELVRDMEMYLTTTDSII
RSRGILLLAELLQRLASKPLNDAVIHSLIGFFTERLADWKALRGALVGCLALMKRKSNVG
MVTINEARAVAQSYLVNLQVQSLGQHDRKLCYELLECLFDRYPDVVAALDDNIVHGICEA
IDGEKDPQCLMITFRIVELLARIFPDPSGPLASFAEELFEILGSYFPIHFTHPKGDEVEV
KRDELSRALMLAFASTPLFEPFAVPLLLEKLSSTLPSTKVESLRYLSYCSVLYGAERMAQ
HAETLWASLKDALFNSLESISSLELEPVDDMGFQGNQIATEALLLLQKVVQQNEGSFLSL
IVGDEEINLTINSITTFKNYGDIPMPNKKKLHAVGRILSVSARASIASCNRVFEIFFLRL
MDTLRLSGSCGDIQLEDGYKFSGRLDYGALYLCIELLTACRCLVLGSEGRTSTTVSAHET
WSCMLQSFCRSLTEAFSFTLVITAHEESQNAYVHSGVRGLQIMATFPGSFLPVPKLIFES
ILTRLMSIITLNFDNGLLWKLSLKALVEIASFVDTRHDSDKATCFKGLVVERIVLLLSSN
DSTMPLSLKLKAISEIGPTGLNFMLSIVQGLEKAVFDRLSDALVHGNIESAESAVQLLEC
LSNKLLPWFDKIGGYEEFPFHFAVDIWDHIAKNTDFNIGLQENELLDATMTAVKLAVAKC
SEESQSIIIQKALNVLFSSATFPSEESISGVNPSKLEASQHNHGLNSFPCRDKWIVSLFA
SVIIAVRPQTRIPNVKVIVHIFLTTLLSGHVPAAQALGSMVNKLPLKSNVMETSDVCSLE
AALDIIFSSIVWTPNDSGLRRFCGTSDGSEIGSSGLRLSNLNSSLLQVHAIVGLAWMGKG
LLMRGHEKVKDITMTIFSCLLSNSDSAALSLKQHPIKDSDEEDVLPLMKSAADAFHVLMS
DSEACLNRRFHAVIRPLYKQRFFSTMMPVLISSVVKSNSSITRSMLYRAFAHIISNTPHS
AILSEAKKLIPLLVDSLSILSEDISNSEVIYSVLLVLSAILTDNTGQEAVVENAYIIITR
LLGLISYPHMMLVRETAIQCLVAMSALPHSRIYPMRSQVLRAISNALDDPKRAVRQEAVR
CRQAWATIASRSLQY
NT seq 3468 nt   +upstreamnt  +downstreamnt
atggccgactcgattcactggattaagcacgtagaatcctatgtcgactcttccggctcc
ccgtctcagcaggttgcaagtttagatgcaattgctgctctattgaagaatgacatgtta
aagatagaagaactggttagagatatggagatgtatctgactaccacagacagcattatt
cgttcgagaggtatactacttcttgcagagttgctgcaacgtcttgcatcaaagccttta
aatgatgctgtcatccatagcttgataggattctttacagaaaggctggcagattggaag
gctttgcgtggtgcacttgttggttgcttggcactgatgaagaggaaaagtaatgttgga
atggtcactattaacgaagcaagagcagttgcccagtcctatttagtaaacttgcaggtg
caatccttggggcaacatgataggaagctctgctatgaacttctggagtgcctatttgat
cgctatcctgacgtggttgcggcactggatgataatattgtccatggaatatgtgaagcg
attgatggggaaaaggatccacagtgtctaatgatcacattccgtattgtggaattattg
gctcgaatatttccagatccatctggtccacttgcaagttttgcggaggagctttttgaa
attttgggaagttacttccctattcattttacacatccaaaaggagatgaagttgaggtg
aaaagggatgagctgtcaagggcactaatgctggcgttcgcttctacacctctttttgag
ccatttgccgttccattgcttcttgaaaaactttcttctactctgccatcgaccaaggtt
gagtctttgaggtatcttagctattgcagtgtgttgtatggagcagagaggatggcacaa
catgctgaaactctttgggcttcactaaaagatgcactgtttaattcattagagtcaatt
tcatctctggagttggaaccagtggatgatatgggttttcaggggaatcaaattgcaaca
gaagctctcctacttctgcaaaaagttgttcagcaaaatgagggctccttcttaagtttg
attgttggtgatgaagaaataaacttgactatcaactccatcactacttttaagaattat
ggggatattcctatgccaaacaagaagaagctacatgcagttggtcgaatattatctgtt
tctgccagggcttccattgcctcctgcaatagagtgtttgagatcttcttcctccgctta
atggacactttgaggctttcaggttcttgtggggatattcagctggaggatggttataag
ttttctggaagacttgattatggtgccttatatctctgcattgaactcctcactgcttgc
agatgtttggttttgggctctgaaggacgaacttcaactactgtgtctgcacatgagaca
tggagctgcatgcttcagagtttttgccgctcattaactgaagccttcagttttacctta
gtaataactgcacatgaagaaagtcagaatgcctatgttcactctggagtgaggggtctg
cagattatggccacatttcctggcagcttcttgcctgtgccaaaattgatatttgaaagt
attttgacgaggttgatgtcgattatcactttgaattttgacaacggacttttgtggaag
ttgtcattgaaggcattggtggaaattgcctcatttgttgatactcgtcatgattcggac
aaggcaacatgctttaagggtcttgttgtagaaaggatcgtattgttgctgtcttccaat
gattcaaccatgcctttatctctcaaactcaaagcaatttctgagattggtccaacaggc
ctgaattttatgctgtctattgtccaagggctggaaaaggccgtatttgacagattatct
gatgctttagtacacggaaacatcgaatcagctgagtccgctgttcagcttttggaatgt
ttatctaataagttgcttccatggtttgataaaattggaggttatgaggaattcccattc
cacttcgctgtagatatttgggaccacattgctaagaacactgatttcaacattggcctg
caggaaaatgagcttcttgatgcaacaatgacagcagtgaagctagccgttgcaaaatgt
tcagaggaaagtcaaagcatcattattcaaaaagccttaaatgtacttttctcaagtgct
actttcccatcagaggagtccatatctggtgtcaatccaagcaaacttgaagcttcacag
cataatcatggtttgaacagttttccgtgcagagacaagtggatagtttcattgtttgct
tcagttatcatagctgttcgtcctcaaacacgcatcccaaatgtaaaagttatagtgcac
atatttttgacaaccctcctcagcggtcatgttcctgcagctcaggctctgggttccatg
gttaacaaactacctctaaaaagcaacgtaatggagacctctgatgtttgtagtttagaa
gcagcattggatataatctttagcagtattgtgtggactccgaacgacagtggtctaagg
agattttgtggaacaagtgatggcagtgagattggtagtagtggactaagacttagtaat
ttaaacagtagcttgcttcaagtccatgccattgttggactggcatggatgggaaaaggt
ttgcttatgcgaggtcatgaaaaagttaaagatataacgatgacgatttttagttgttta
ctgtcaaacagtgatagtgcggccttgtcattgaagcagcatccgattaaagacagtgat
gaggaggatgtgcttcctcttatgaaatctgcagcagatgcattccatgttcttatgagc
gattccgaagcttgtttgaacagaagatttcatgcagttattagaccgctctataagcaa
cgctttttctctaccatgatgccggttctgatatcttcagtggtgaagtctaattcatca
atcacaagatccatgctgtatcgagcctttgcacacattatatccaatactccacacagt
gccatcttgagtgaagctaagaagctcatccccttattagtggatagcttatcaatatta
agtgaggatatttctaattcggaggtaatatacagtgtcctgttggtattatctgcaata
ctgacggacaacactggtcaagaagcagtggtggagaatgcatatatcattattactcgc
cttcttgggcttatctcctacccccatatgatgcttgttcgagagacagcgattcagtgt
cttgttgcgatgtctgcactgccccattcaaggatatatcccatgagatcacaggtgcta
cgagctatatcaaatgctcttgatgatccaaaacgagctgtacggcaagaagctgtcaga
tgtcggcaagcatgggcaacgattgcatctaggagtcttcaatattga

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