Rhododendron vialii: 131299246
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Entry
131299246 CDS
T09330
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
rvl
Rhododendron vialii
Pathway
rvl03082
ATP-dependent chromatin remodeling
rvl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131299246
03083 Polycomb repressive complex
131299246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131299246
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131299246
Histone modification proteins
HAT complexes
HATB complex
131299246
HDAC complexes
Sin3A-HDAC complex
131299246
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131299246
PRC2.2
131299246
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131299246
Heterochromatin formation proteins
Other heterochromatin formation proteins
131299246
Chromatin remodeling factors
NuRD complex
131299246
NuRF complex
131299246
NuRF complex (fruit fly)
131299246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD_LRWD1
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
131299246
NCBI-ProteinID:
XP_058180868
LinkDB
All DBs
Position
8a:33428304..33433625
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDDEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPGREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSDCGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINAAPKNKALDAVQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLYIWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPSEDWVVASVAEDNILQIWQMAENIYHDEDDLPGDES
TKVS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgacgaggagatgaggggagagatagaggagaggctgataaacgaggag
tacaagatctggaagaagaacacgccgttcctctacgacctggtcatcacgcacgcgctt
gagtggccgtcgctcaccgttgagtggctccccggccgggaagagccgccggggaaggac
tactccgtgcagaagatgatactcgggacccacacgtccgagaacgagcccaactacctc
atgctggcccaggtccagctccccctcgaggacgccgagaacgatgcccgccattacgac
gacgaccggtcggattgcggcggcttcggttgcgccaacggcaaggttcaaataattcag
caaataaatcatgatggagaagttaaccgggctcgttatatgccccaaaacccatttatt
atagccactaaaacagttaatgcagaagtatatgttttcgactacagcaaacacccatcg
aagcctcctctagatggtgcatgcaatcctgatttgaggttaaggggccacaacactgaa
ggatatggtttatcatggagccagttcaagcaggggcatttattgagcggttccgatgat
gcccaaatttgcttgtgggacatcaatgcagctcccaagaacaaggctcttgatgctgtg
caaatatttaaggttcatgaaggtgttgtagaagacgttgcatggcatcttaggcacgaa
tacttatttggttcagttggggatgaccaatatctgtatatttgggatctccggactcca
tcagtcaccaagccaatccaatctgtagttgctcatcaaagtgaagttaactgcttggct
tttaaccccttcaatgaatgggttgtggcgacaggttctacagataagactgtgaagtta
tttgatcttcgcaagatctccacagctctccatacatttgattgtcacaaggaggaggtt
ttccaagttgggtggaatccaaagaatgagaccattctagcttcttgttgtcttgggagg
aggcttatggtgtgggatcttagtaggattgacgaagaacagacaccagaggatgccgaa
gatggcccacccgagttgcttttcattcacggtggtcatacaagtaaaatttccgatttc
tcatggaaccctagtgaagattgggttgttgctagtgtagctgaagataacatacttcag
atatggcagatggcagagaacatataccacgacgaagatgacctaccaggagatgaatca
acaaaagtttcctaa
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