Rhododendron vialii: 131299594
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Entry
131299594 CDS
T09330
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00531
Glycosaminoglycan degradation
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
131299594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rvl00536
]
131299594
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
131299594
Glycosaminoglycan binding proteins [BR:
rvl00536
]
Heparan sulfate / Heparin
Enzymes
131299594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
131299594
NCBI-ProteinID:
XP_058181164
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All DBs
Position
1a:5896951..5901707
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AA seq
542 aa
AA seq
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MGFLFLQMGFCIWVCLCALCFISVNSESGTVGGIVFIEGKSAIGRTDTDFICATLDWWPP
EKCDYGTCSWGHASLLNLDLSNNIFLNAVKAFSPLKIRLGGTLQDKVIYETEDQRQPCLQ
FSKNTSELFSFTEGCLPLSRWDELNNFFNKSGARVIFGLNALNGRSLQPDGSAVGAWDST
NAESFMRYTVKKDYSIYGWELGNELSGSGVGVRVAADQYATDTISLQKVVQDIYKSNETR
PLTIGPGGFFDANWFKEFADKTTNSVDVLTHHIYNLGPGVDEHLVEKIVDPSYLDGEADT
FSKLQSTLKSSTTSATAWVGEAGGAYNSGHDLVTNAFVFSFWYLDQLGMASTYDTKTYCR
QTLVGGNYGLLNTTTFVPNPDYYSALLWHRLMGENVLSTNFSGTKKIRAYAHCAKHSQGI
TLLLINLDNTTTVEAKVNFNGTRILRQQRHKHRSRGHREKVVRVHQQQKKIERMREEYHL
TAKDGNLHSQIMLLNGEILTVNSTGHIPPLVPVKVNSSEPITVAPFSIVFSHIPNVVLPA
CR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgtttttgcaaatgggtttctgcatctgggtttgtctctgtgctctgtgt
ttcatttctgtgaattcagagagtggaactgttggaggcattgttttcatagagggtaag
agtgccattggaagaacagacacagatttcatttgtgcaacattggattggtggcctcct
gagaagtgtgattatgggacttgtagctggggccatgcttctctcctcaacctggacctc
agcaacaacattttcttaaatgctgtgaaagcattttcaccattgaaaattcgattgggt
ggcactttgcaagataaggtcatctatgaaaccgaagatcaacggcaaccctgccttcag
ttttcgaaaaacacctcggaattgtttagtttcacagaagggtgccttcccttatccaga
tgggatgaactaaacaatttcttcaataaatctggggctcgggttatttttggattaaat
gctctcaatggaagatccctacagcctgatggttctgctgtaggagcttgggattctaca
aatgctgaatcttttatgcgttataccgttaagaaggattactcaatttatggttgggag
cttggaaatgaattgagtgggagcggagttggggtaagagtcgcagcagatcaatatgcc
accgacacaatctctctgcaaaaagttgttcaggatatttacaagagcaatgaaactagg
ccactaactataggaccgggaggattctttgacgcaaactggttcaaagaatttgcagat
aaaacaaccaactccgttgatgtcctcacccatcacatatataatcttggcccaggagtg
gatgaacaccttgtggaaaagattgttgatccatcctatcttgatggtgaggcagataca
ttcagtaagctccaaagcaccctgaagagttctaccacttcagcaactgcgtgggtaggt
gaggccggaggggcctacaacagtggccacgatcttgtcaccaatgcctttgtgtttagt
ttctggtatttggatcaacttggtatggcatcaacttatgatacaaagacatactgcaga
cagacattagttggaggaaattatggcttactcaatactacaaccttcgtgccaaatccg
gactactacagtgctcttctttggcatcgattaatgggagaaaatgttctatcgacgaac
ttttctgggacaaagaagatacgagcatatgctcattgtgcaaagcattcccaaggaatc
acactgctattgatcaacctagacaataccaccaccgtcgaggctaaagtaaattttaac
ggtactcggatattgcgacagcagcgacacaaacacaggtctcgtggtcacagagaaaag
gttgttcgagtacatcaacagcaaaagaaaatcgagaggatgagagaggaataccatctg
actgcaaaggatggcaatttacacagccagattatgctgctcaacggggaaatcttgact
gtaaattcaactggacacattcctcctttggtgcctgtgaaagtaaattcatcggagccc
ataaccgttgctcctttttccattgtgttttctcacatccctaatgttgttctccctgct
tgtaggtag
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