Rhododendron vialii: 131299700
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Entry
131299700 CDS
T09330
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 19-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131299700
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131299700
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
131299700
NCBI-ProteinID:
XP_058181262
LinkDB
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Position
9a:22250172..22259187
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AA seq
545 aa
AA seq
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MQYRVVSVSKFVWNSKVTTTPENSAILADEMGXGKTIQAITYLTLLKHLEGDPGPHLIVC
PASVLENWERELKKWCPSFSVLQYHGAGRAAYSKELSSLGKTGFPPPFNVILACYSLFER
CSVQQKDDWKVLKRWNWSCVLMDEAHALKDKSSYRWKNLMSVARKANQRLMLTGXPLQND
LHVLWSLLEFMMPDLFDTGDVDLKKLLNSGDTDLISXMKSIMGPFILRRLKADVMEQLVP
KIQEVKYVEMVKQQDDAYKEAIEECRARTXTNNGTSTLPQRQISNYFVQFHKIANHPLLV
RRMYTDEDVVRFAKKLHPMGVFGFECTLDRVIEELKCYNDYSIHRLLLHHGVSDKKGVLS
DEHVMISVKCQELANLLPSLKESGHWVLIFSQWTSMLDILERTLDVVRVTYRRLDGSTQV
TERQTIVDTFNNDTSIFTCLLSTRAGGQGLNLIGADTVDIHDMDFNPQIDQQAEDRCHRI
GQTKEVTMYRLVTKGXDENVYEIAKQKLVLDAAVLKSGEEVKTEGGDMPDNKTMGEILSS
LLLGS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcgtgtagtttcagtatcaaagtttgtatggaactcaaaagtaactactact
ccagagaacagtgccatattggcagatgagatgggtnctggtaagacaatacaggctata
acatatttaaccttgctgaaacacttggaaggtgatccaggaccccatttaattgtatgc
cctgcttctgttttggaaaactgggaaagagagctgaagaagtggtgtccctcattttct
gtactccagtatcatggggctgggcgggcagcgtattcaaaagaattgagctctctgggc
aagactggatttccacctccatttaatgttattctcgcgtgttattcactttttgagcga
tgcagtgttcaacagaaagatgactggaaagttttgaaacgctggaattggagttgtgtg
ctgatggatgaggctcatgcgttgaaagataaaagcagctataggtggaaaaacctaatg
tccgttgcccggaaagccaaccagcgcctgatgcttacagggnccccactacaaaatgat
ttacatgtattatggtcattgttggagtttatgatgcctgatctatttgacactggagat
gtagacttgaaaaagcttttgaattcgggagatacggatttgatttctnttatgaagtcc
ataatgggcccttttattttgagacgtttaaaagctgatgtaatggagcaactagtccca
aagattcaagaggttaagtacgtggaaatggttaagcaacaggatgatgcttataaggaa
gccattgaggagtgtcgtgctcgtacgtagactaataatggtactagcactctccctcag
cgtcagatttccaactattttgtccagtttcataagattgcaaaccatcctttactggtg
aggcgtatgtatactgatgaagatgttgtccggtttgctaaaaagttgcatcctatgggt
gtgtttggctttgaatgtaccttggacagagtaattgaggagctcaagtgctacaatgac
tactctattcaccggcttttacttcatcatggtgtgtctgataagaagggagttctttca
gatgagcatgttatgatttcagtaaaatgtcaggaactagccaatcttctaccatcacta
aaagaaagtgggcattgggttcttattttcagtcaatggacatccatgcttgatatcttg
gagaggactttggatgtagtccgggttacttataggcgccttgatggaagtactcaggtt
acggagagacaaacaatagtagatacattcaataatgacacatcaatattcacatgcttg
ttgtctacaagagctggagggcagggcttgaacttgattggagctgacaccgttgacatc
cacgacatggatttcaatccacagattgaccaacaagctgaggatcgatgtcatcgtatt
ggtcagacaaaagaggttacgatgtataggttggtgaccaagggtnatgatgagaatgta
tatgagattgcaaaacagaaattagtattggatgctgctgtgctcaaatccggcgaggaa
gtgaaaactgaaggtggagatatgcccgataataagaccatgggagagatattgtcgtca
ctgttgctaggatcataa
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