Rhododendron vialii: 131299849
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Entry
131299849 CDS
T09330
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131299849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131299849
Spliceosome [BR:
rvl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131299849
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
HrpB2
Motif
Other DBs
NCBI-GeneID:
131299849
NCBI-ProteinID:
XP_058181406
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Position
9a:36035429..36037849
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AA seq
473 aa
AA seq
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MGIPTKAYCAVEEVKENATRKSQKVFVHVPSQIAADEVEEIGMQHGHIRELYPVTLLPTF
LHSPLDLSIGVEHLLRNHVFNLLPNLNVAELFKAFAEDDVDLDNVNYDDSDTASKLLETQ
RYLDIMKKVEDALEKKGSDMSNSSDMVLQDYQLIVDCTALTVDIENEISIVHNFIRDNYR
SKFPELQSLVYHPIDYARLVKKIGNETDLTLVDLNGLLPSATIMVVSIMASTTGGKRLPE
QVLRNTIDACGRSLALDSSRKKVLYFLETRMGHIAPNLSAIVGSAVAAKIMVAAGGLSPL
ANLPSCTVPLLGAKKTNLAGFSTATTSQFRVGYIEETDIFQSTPPSLRMGACRLLAGKSM
LAARIDSVRGHPTGNRGRALRDKIHKTIEMWQEPPPAKCPKPLLVPDCKPKKKRGGRRLR
RMKQRYATTDMRKMANRIQFGVAEETYLGDGLGEVHGMLGQALRVSAAKSKLN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggaattccaactaaagcttactgcgctgttgaagaggttaaagagaatgccacacgg
aaaagccagaaggtctttgtgcacgtgccttcacagattgcggctgatgaagttgaggaa
attggcatgcaacatggtcacatacgtgaactttaccccgttacactattacctacgttt
ttacactcgcctcttgatttgtcaataggtgttgagcacttgctgaggaatcatgtattt
aacctacttccgaatctcaacgtggctgaactatttaaagcttttgccgaagacgacgtt
gatctggataatgttaattacgatgattcggacacagcctctaaattgctggaaacacag
cgctacctcgatatcatgaagaaagttgaagatgctcttgagaaaaagggatctgatatg
tcgaatagcagtgacatggttctacaagactaccagttaatagttgactgcacagctttg
acagttgacattgagaatgagatttctatcgtccataattttatccgagacaactaccgg
tcgaaattccctgagcttcaatcgcttgtttatcaccctatcgattatgctcgactagtt
aaaaagatcggcaatgaaacggacctgaccctagtcgacttgaatggtttactaccctcc
gccactatcatggtggtttccatcatggcttcaaccaccggaggtaaacgacttccggag
caagtccttcgaaacaccattgacgcgtgcggccgttctcttgctcttgattcgtcacgg
aaaaaggtgctttattttctggagactagaatgggacatattgcaccgaatctttctgct
attgtggggagcgcagttgcggccaaaattatggtggctgctggtggtttatcaccattg
gctaacctgccttcttgcactgtcccgctactcggtgctaagaaaacaaacttggcaggt
ttttctaccgcgacaacatctcagtttcgtgtgggctatattgaagaaacagacattttt
cagagtacacccccttctctgaggatgggcgcctgccggttactggctggaaaatcaatg
ctcgcggcacgcatagattccgtcaggggacatccaactggtaatagagggagagccctt
cgcgataagatccacaaaacaattgaaatgtggcaagagccaccaccagcaaagtgtcct
aaaccgcttttggttcctgattgtaagcccaagaagaagaggggcggccggcggttgagg
aggatgaagcaaaggtatgctactacggacatgaggaagatggcaaataggattcagttt
ggagtagcggaagaaacttatttaggtgatggacttggagaagtacatggtatgcttggt
caggcgttgcgtgtatcagctgctaagagcaagctaaattag
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