Rhododendron vialii: 131299917
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Entry
131299917 CDS
T09330
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131299917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131299917
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
131299917
Prokaryotic type
Archaeal type
TFE
131299917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
131299917
NCBI-ProteinID:
XP_058181473
LinkDB
All DBs
Position
9a:28516290..28533569
Genome browser
AA seq
477 aa
AA seq
DB search
MNSNGMSVEPFNRLVKLAARAFYDDISTKGENQPKTGRSDNRGIAVVILDALTRRQWVRE
EDLAKDLKLHSKQLRRTLRFFEEEKLVTRDHRKETAKGAKIYSAAVAATADGQHGREGEE
KIKLHTHSYCCLDYAQIYDVVRYRLHRMRKKLKDELENKNTVQEYICPNCTKRYTALDAL
RLVSTEDEYFHCESCNGELVAESDKLAAQEMGDGDDNARRRRREKLKDMLQKLEEQLKPL
MDQLSRVKDLPVPEFGNLHAWELRAAVRTGNSDFNANDASRSAQGFGGTPMPCVGETKVE
VAFSGVDERGEDTKSENSNSAMKVLPPWMIKQGMNLTKEQRGEVKEEMKMEGTSAPVDLS
EDKKDKKSMTQNTDAKILQDEYVKAYYAAILQMQQKEAAKREQELSNTDISNGVYAKSDR
QVGSKSKRDDNEGDEDIEWEEAAPTGNAGESYKVNDLNVEADASVDEDEDDIDWEEG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaacggcatgagcgtcgaaccattcaaccggttggtgaagctagcggctagg
gcgttttacgatgacatctcgacgaaaggagagaatcagcccaaaactgggaggagtgac
aatcgagggattgctgtggttatacttgatgctctaaccagacgtcagtgggtaagagag
gaagatttagcaaaggacttgaagctacactcaaagcaacttcgcaggacactgcgattt
tttgaagaagaaaagctagtcactagggaccataggaaagagacagcaaaaggtgcaaag
atatatagtgccgcagtagctgccacagctgatggtcagcatgggcgagagggagaagaa
aagattaagctgcacactcactcatattgttgtttggactatgcacagatatatgatgtt
gtgaggtacagactgcaccgaatgaggaaaaagctgaaagatgagcttgagaacaagaac
actgttcaggagtatatatgccccaactgtacaaaaagatatactgctttggatgcacta
cgacttgtttctacagaggatgaatattttcattgcgaaagttgtaatggggaacttgtg
gctgagagtgacaagttagctgctcaagaaatgggggatggagatgacaatgcaaggagg
cggcgacgtgaaaagctgaaggacatgcttcaaaagctggaggaacagcttaagccatta
atggatcaactcagcagagtaaaagatttgccagtccctgaatttggaaatctccacgcg
tgggaacttcgtgcggctgtgcgtacaggaaatagtgattttaatgccaatgatgcctca
agatctgcccaaggttttggtggaacacctatgccatgtgttggagagacaaaggttgaa
gtagccttttctggtgttgatgaaagaggagaggacacgaaatctgagaattcaaattca
gctatgaaagttctacctccttggatgatcaagcaaggtatgaaccttacaaaagaacag
cgtggagaggttaaggaggagatgaagatggagggcacttcagcacctgtcgacctatca
gaggacaaaaaggacaaaaagtcaatgacccaaaatactgatgctaaaattttacaggat
gaatatgttaaagcctattatgcggctatacttcagatgcaacaaaaggaagctgccaag
agagaacaggagttgtcaaatactgacatctctaatggtgtgtatgccaaatctgatcgt
caagttggcagtaagtccaaacgtgatgacaatgagggagatgaagatattgaatgggaa
gaagctgcacctacaggcaatgcaggtgaaagttacaaggtgaatgatttgaatgttgaa
gctgatgcatcagtagatgaagatgaagatgatatagactgggaagagggctga
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