Rhododendron vialii: 131299918
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Entry
131299918 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131299918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131299918
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131299918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
131299918
NCBI-ProteinID:
XP_058181474
LinkDB
All DBs
Position
9a:24709700..24728775
Genome browser
AA seq
1478 aa
AA seq
DB search
MSSENEIVLRDVTNACLVVSDRIGRDLAAHSDLEEALEASRYASHPYSTHPREWPPLVEV
VDTWELPPVLIERYNAAGGEGTALCGIFPEIRRAWATVDNSLFLWRFDKWDGQCPEYSGE
EQAICAVDLAKAKPGIFVEAIQYLLVLATPVELILLGVCCSGSGDGMDPYAEVSLQPLPE
YTIPSDGITMTCITCTDRGHIFLAGRDGHIYELQYTTGSGWHKRCRKVCLTAGLGSVISR
WVVPNLFKFGTVDPIVEMVVDNERHILYARTEDMKIQVFVLGPQGDGPLKKAAEERNLIN
AHYGGRQSAGPRAPSRSAKTSIVSISPLSTLESKWLHLVAVLSDGRRLYLSTTPSTGSSV
VGGLGGFSTNGQKPSCLKVVATRPSPPLGVGGAFGALSLVGRSQSEDLSLKIESAYYSAG
TLVLSDSSPSTSSSLLIVNKDSSTQSSSSANIATGARSSRALRESVSSLPIEGRMLCVAD
ILPLPETAAIVHSLYSQLEFCGFDNSGESIEKASRKLWARGDLSTQHILPRRRIVLFSTV
GMMEVVFNRPVDILRRIFESNLPRSLLEDFFSRFGAGEAAAMCLMLAARIVHSESSISNV
VAEKAAEAFEDPRLVGVPQLEGSGALGNTRTATGGFSMGQVVQEAEPVFSGAHEGLCLCS
SRLLLPVWDFPVFVVTGGIVACRFSAGAMQILEDKFRSLERFLRSRRNQRRGLYGCVAGL
GDLTGSILYGTGSDLSTGDRSMVRNLFGSNSRIESGDGGASNKRQRLPYSPAELAAMEVR
AIECIRQLLLRCAEALFLLQLLSQHHVTRLVQNIDANLQQTLVQLTFHQLVCSEEGDQLA
TRLISALMEYYTGPDGRGTVDDISGRLRDRCPSYFKEADYRFYLAVECLERAAASSDTED
RQNLAREAFNYLSKVPESADLQTVCKRFADLRFYEAVVQLSLQKAQALDPSGDALNEQID
AGMREHALARREQCYEIVTSALCALKGETSQREFGSPIRPVVQSALDPASRKKYICQIIQ
LGVQSPDRLFHKYLYRALIDLGLENELLEYGGPDLVPFLQSAGREPVQEVRAVPAVSSAT
SPMGHSGVHILSNHQAKYFELLARYYVMKRQHVLAAHALLRLAERRPVDGGDVPTLEQRR
QYLSHAVLQAKNSSNSDGVGSTHGAFDDGLLDLLEGKLAVLGFQIKIKKELEVMASKLEA
TPSTSESAPSDSSPDGSHVPDANFVHSIREKVKEVSLDLKSITQLYNEYAVPLELWEICL
QMLYFANYSGDTDSSIVRETWARLIDQALSRGGIAEACAVLKRVGSHIYPGDGAALPLDT
LCLHLEKAALERLVSGVESVKDDDVARALLAACKGAIEPVLNTYDQLLSNGAILPSPNLR
LRLLRSVLVVLHEWAMSVFAQRMNTSTTGASLILGGTFSVDQTIIFSQGIRDKIISAANR
YMTEVRRLALPQNHTEAVYRGFRELEESLLTPFSLNQF
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgaaaacgagatcgtattgcgcgacgtcacgaacgcctgtctcgtggtgagc
gaccgcattggccgagacctcgcggctcacagcgacctcgaagaagcactggaagcttcc
agatacgccagtcatccctactctactcaccccagagagtggcctcctttggttgaagtg
gtagatacctgggagctgcctcctgtacttattgaaagatataatgcagctggtggggaa
ggaactgctctgtgtggaatatttccagagatacggagagcttgggcaacagtagataac
tctctgtttctatggcgttttgataaatgggatggtcagtgtcctgaatatagtggggag
gaacaagctatttgtgctgttgacctggccaaagctaaacctggcatttttgttgaagct
atccagtatcttttggtcttagcaactcctgttgagttgattcttttaggagtatgctgt
tctggaagtggtgatggtatggatccgtatgcagaggtttcactgcagcctttgccagag
tatactataccatctgatggcatcaccatgacatgcatcacttgtactgatagaggtcac
attttcctggctggccgtgatggccacatttatgagttgcagtatacaactggttcaggt
tggcacaagcgttgtcgtaaagtttgcctgactgcaggtttgggaagtgtcatttcgagg
tgggttgtaccaaacttattcaagtttggaactgtggaccctattgttgaaatggtggtt
gataacgagagacacattttgtatgcacgcactgaagatatgaaaattcaagtgtttgtt
cttgggccacaaggagatggtccacttaagaaagctgcagaagagagaaatttgataaat
gcacattatggaggtagacaatcagcagggccaagagccccttctcgatcggcaaaaaca
tcaatagttagcatttcgcctttgtcaacactggagtcaaagtggctacatcttgttgct
gttttgtcagatggcagaagattgtacctatccactactccatctactggaagcagtgta
gttggaggtttgggtggattcagtactaatggtcagaagccaagctgtttaaaagtagta
gcaactaggccttctcctcctttgggtgttggcggtgctttcggtgccctatctcttgtt
ggtcgatctcagagcgaagatttatcccttaaaatagaatcagcatattattctgctgga
actcttgttctttctgactcatctccatcaacctcttcttcgcttctgattgtgaacaaa
gattcaagcacacagtcttcttcatcagctaatatagcaacaggtgccaggagttctcgt
gcattacgagaatctgtatcttctctacccattgaaggacgaatgctttgtgtggctgac
attttacctcttccggaaacagcagctattgtgcactcactatattcccaattggaattc
tgtggatttgataactcgggggaatccattgaaaaggcatcccgaaaactctgggctaga
ggcgatctttcaacacaacacatattaccaaggagaagaatcgtcctattcagcacagtg
ggcatgatggaagttgttttcaataggccagttgacatactgaggaggatatttgagtcc
aacttgccaagatcattgttggaagattttttcagtcgctttggagctggtgaggctgcg
gcaatgtgtttaatgctggctgcaagaatagtccattctgaaagttcgataagcaatgtt
gttgctgagaaggcagcagaagcttttgaggaccctagacttgttggagtacctcaacta
gagggtagtggtgcattagggaatacaagaacagcaactggcggatttagtatggggcaa
gttgtccaagaggctgaacctgttttttcaggtgcacatgaagggctatgcttgtgctca
tcaaggttgcttttacctgtatgggattttcctgtttttgtggtgacaggtgggatagtt
gcatgcagattctctgctggggcaatgcaaattcttgaagacaagtttcgatctttagag
aggtttctaagatctaggaggaatcagagaaggggactgtacggttgtgttgccggcctt
ggagacttgactggttcaatattgtatggaactggttcagatctcagtactggagataga
agtatggtacggaacttgtttggttctaactctcggattgaatctggtgatggtggcgca
tctaataaaaggcaaaggcttccatatagtccggctgaactagctgcaatggaggtaagg
gcaattgaatgtattaggcaattgctccttagatgcgccgaagctctttttttgctacaa
cttctttcacagcatcatgtgacgcgcttggttcagaacattgatgctaatttgcaacag
acattggttcagctgacattccatcaactagtctgttctgaggaaggagatcaacttgct
acaaggctcatatctgctttgatggagtattacactggacctgatggcaggggaacagta
gatgatatcagtggtagattacgcgatcggtgtccaagctatttcaaggaagcagattac
agattttacttggctgtggaatgtcttgagagagctgctgcaagttctgatactgaggat
aggcaaaatctagctagagaagctttcaactacttgagtaaagttccagagtcggcagac
ttgcaaactgtttgcaaacgttttgcagacctgagattttatgaagctgtggttcaactg
tctctgcaaaaagcccaggcccttgacccttctggtgatgctcttaatgagcagatagat
gcaggaatgcgagaacatgcacttgctcggcgtgagcagtgttatgagattgttactagt
gctttgtgtgctctgaaaggagaaacttctcaaagggaattcggttctcctatcagacct
gttgtgcaatctgcacttgatccagcctctcggaagaaatatatctgccagattattcag
cttggtgtccagtcacctgatagactatttcataaatacctgtatcgggcattaattgat
ttgggccttgaaaatgagttgctggagtatggtggccctgatttggtgccttttctgcaa
agtgctgggcgtgaacctgtacaagaggttcgggctgttcctgcagtgtcatcagcaaca
tctccaatgggtcattcaggagtacacattttgtccaatcatcaagcaaaatattttgag
cttctggcacgttattatgtcatgaagcggcagcatgttcttgctgctcacgcactgtta
agacttgcagaaaggaggcctgttgatgggggggatgtccctacactggaacagaggcgt
cagtacctaagtcatgcagttctgcaggcgaagaattcaagtaacagcgatggagtaggt
tctacccatggtgcttttgacgatggcctgctggatttgcttgaaggaaagcttgctgtt
cttggatttcaaataaagataaaaaaggaattggaggtcatggcatctaagttggaggca
actcctagcacatctgaatctgctccaagtgactcatctcctgatggaagccatgttcct
gatgccaattttgtgcattctataagagaaaaggtcaaagaggtatcattggatttgaag
agcatcactcaactgtataacgagtatgcagttccgttagagctctgggagatatgtctg
caaatgctgtactttgctaactattcaggtgacactgatagtagcattgttagagagaca
tgggcaaggctcatcgatcaagctctttcaaggggtggcattgctgaagcttgtgcagtt
ctgaaaagggttggctcccatatttatcctggagatggagctgcattacctttagataca
ttatgtcttcaccttgaaaaggctgccttggagcgattggtttcaggggttgaatcggtt
aaagatgacgatgtggcaagggctcttcttgctgcctgcaagggtgcaatagaacctgtc
ttgaacacgtatgaccagctgttatcaaatggagcaattttgccgtccccaaatttaaga
ttacggctactccgttctgtgctggtagtactgcatgagtgggcaatgtctgtatttgca
cagagaatgaatacaagtactactggagcatctctaattcttggcggaacattctcagta
gatcaaacaataatatttagccaagggattcgtgataagatcataagtgcagcaaacagg
tatatgaccgaggttcgtaggttagcccttccccagaaccatacagaggctgtctaccga
ggttttcgagaacttgaagagtcacttctaactcctttttctttaaaccaattttga
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