Rhododendron vialii: 131299963
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Entry
131299963 CDS
T09330
Name
(RefSeq) putative chloride channel-like protein CLC-g isoform X1
KO
K05016
chloride channel 7
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131299963
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131299963
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131299963
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131299963
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
131299963
Ion channels [BR:
rvl04040
]
Chloride channels
Chloride channel (CLC)
131299963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
131299963
NCBI-ProteinID:
XP_058181546
LinkDB
All DBs
Position
1a:6594438..6604130
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AA seq
784 aa
AA seq
DB search
MSNNADGGGGGEDEESITQPLLPLSLRRSASNATSQLAIVGSNLCPIESLDYEIIENDFF
KQDWRGRSKIQICQYIVMKWTLCFLIGLLVSLVGVANNLAVENIAGMKFVVTSNMMLATK
FWAAFIVFTASNFALTLFSSLITVFISPEAAGSGIPEVKAYLNGVDAPGIFSLRTLVVKI
VGSICAVSSSLHTGKAGPMVHTGACVAALMGQGGSKKYGLTWRWLRYFKNDRDRRDLVTC
GSAAGIAAAFRAPVGGVLFALEEMASWWRSALLWRAFFTTAVVAIVLRAFIDFCYSGKCG
LFGTGGLIMYDVTSVNLPYHIGDVPPVLLLGVIGGILGSFYNFLLDKVLRIYNLVYKKGT
IYKILIACSISIFTSCLLFGLPWLTSCQACPTDAPEPCPTIGRSGNYKKFQCPAGHYNDL
ASLIFNTNDDAIRNLFSKNTDSEFHMSSILIFFVTCFFLSIFSYGIAVPSGLFVPVILTG
ASYGRFIGMLFGSRSNLNHGLFAVLGSASLLGGSMRMTVSLCVIILELTNNLLLLPLIMV
VLLISKTVADAFNGNIYDLIMRLKGFPYLETHVEPYMRQLTVNDVVTGPLQLFHGIEKVS
NIVHVLRTTRHNGFPVVDEPPLSETPILFGLILRAHLITLLKKKAFVPNPMTTGVESFDQ
FTAGDFEKKGCLGNSDKIEDVDLSEEEMEMFVDLHPFTNASPYTVVDTMSLAKALILFRD
VGLRHLLVIPKISNRSPVVGILTRHDFMPEHILGMHPSLVKSKWKKLRIRFPQLSFRITS
QISL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaatgcagacggaggaggaggaggagaagacgaagaatccataacccagccc
ctcctccctctctccctccgccgatcagcctccaacgccacctctcagctcgctatcgtc
ggctccaacctctgccccatcgaaagcctcgactacgagattatagagaacgatttcttc
aagcaagactggaggggcaggagcaagatccagatatgccagtacatagttatgaaatgg
acgctttgtttccttatcgggctcctcgtgagtttggttggggtcgccaacaacctcgcc
gttgagaacattgctggcatgaagttcgttgtcacgtccaatatgatgttggccacaaag
ttttgggcggcatttattgtttttactgcttctaattttgcgctcaccttattctcaagt
ttgatcacggtgttcatatcaccagaggctgctggttcgggtataccagaagtgaaggcg
tacttaaatggcgtggacgcgccagggatattttctctacggactctggtcgttaagatt
gttggtagcatttgtgcagtatcatcatcacttcataccggcaaggcagggcccatggtg
cacactggtgcatgtgtggcagcattaatgggtcagggtgggtcaaagaaatatgggttg
acatggagatggctacgatatttcaagaatgaccgtgaccgccgagatcttgtgacatgt
ggatcagctgctggaatagctgctgcttttcgtgccccagttggtggtgtgttgtttgct
cttgaggaaatggcatcatggtggagaagtgcccttttatggagagcttttttcacaaca
gcagttgttgccattgtgcttcgggctttcattgacttctgctattctggaaaatgtggg
ctattcggaactggtggtttgataatgtatgatgtcacttcagtaaatcttccgtatcac
attggggatgtgcctcctgttcttcttcttggagtgatagggggcatattgggaagtttt
tacaattttcttttagacaaggttctgcggatttacaatctagtttataagaaaggcaca
atttacaagatactcattgcgtgttcaatctccattttcacatcatgtcttctatttgga
ttgccgtggctcacatcttgccaggcttgcccaactgatgcaccagaaccttgcccgaca
attggtcgttctggcaactacaagaagttccagtgcccggctggtcattacaatgatcta
gccagcctcattttcaacacaaacgacgatgcaatcagaaacctattcagcaagaacacc
gactctgagttccacatgtcatctattctgatattcttcgtcacatgttttttcctcagt
atatttagctacgggattgcggttccttctggtctctttgtacctgttatcctgaccggt
gcatcttatggtcgttttatcggaatgctatttggttcgcgttcgaatctcaaccacggc
ctttttgctgtgttgggttctgcttcacttcttggtgggtccatgaggatgacagtttct
ttgtgtgttattattctagagttgaccaataacctgttactcctgcccctaatcatggtg
gttcttcttatttcaaaaacagtagctgatgcattcaacggcaatatttacgatcttata
atgagattgaagggttttccttacctagaaactcatgtggagccatacatgagacaatta
acagtcaatgatgtggtcacaggaccacttcagctatttcatggcattgagaaggttagt
aacatagtacatgttctcagaacaacaaggcataatgggtttcccgttgtagatgagcct
ccactttctgaaaccccaattttgttcggtttaatcctccgggcccatctaatcactttg
ctgaagaagaaagctttcgtgccaaatccaatgacaactggcgttgaatcgtttgatcag
ttcacggcaggggattttgaaaagaagggttgtttgggaaatagtgataaaatagaagat
gttgatttgagcgaagaagagatggagatgtttgttgatttgcatccttttacaaatgcg
tctccgtatactgtggtggacacaatgtcactggcaaaggcccttatacttttccgagac
gttgggttaaggcacctgctggttatacctaaaatttcaaatagatcaccggtggtgggt
atattgacaagacacgacttcatgccagaacacatcttgggtatgcatccttcattggtg
aagagcaagtggaaaaaattaagaattcggtttcctcaactaagcttcagaattacctcc
caaataagtttgtga
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