Rhododendron vialii: 131300033
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Entry
131300033 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131300033 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
rvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131300033
09124 Replication and repair
03420 Nucleotide excision repair
131300033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131300033
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131300033
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131300033
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131300033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
131300033
NCBI-ProteinID:
XP_058181654
LinkDB
All DBs
Position
1a:complement(6621779..6680511)
Genome browser
AA seq
184 aa
AA seq
DB search
MVVANSFSKEMAIRKRIASIFNKREEEEVEDMTFNLIEGIDVPAIDGKIAQYHKENAEQI
MNAQQFKKKAQARKAEEYAAALAASKGHSDSDPTTSQSFQGGVGAGAQGYYAPSLAGGAI
EQPRPTGMAPQPIPIGSNLDMHAYNYNNEEMTRLRAERGGRAGGWGMELSRKRALVEAFS
SIWI
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcgccaattccttctccaaggagatggccattcgcaaaagaatcgccagcata
tttaataaaagagaggaggaggaagtggaagatatgacgttcaatttgattgaaggaata
gatgttcctgctattgacggaaaaattgcacaataccacaaagaaaatgctgaacaaata
atgaatgctcaacagttcaaaaaaaaagctcaagcccgcaaggctgaagaatatgctgca
gctttagccgcaagcaagggacactctgatagtgatccgaccacgagccagagctttcaa
ggaggtgtcggtgcaggtgcacagggttattatgccccctcgcttgcagggggagcaatt
gagcagccacggccaacaggcatggccccgcagcccattcctatcggatcaaacctggac
atgcacgcctacaattacaacaatgaagaaatgacgagactcagagcagagagaggtgga
agggcgggcgggtggggcatggaattgagcaggaaacgggcactcgttgaagccttcagt
agcatttggatttga
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