Rhododendron vialii: 131300082
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Entry
131300082 CDS
T09330
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131300082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131300082
Spliceosome [BR:
rvl03041
]
Common components
Common spliceosomal components
SR proteins
131300082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
Nup35_RRM_2
SET_assoc
RRM_Nup35
DUF2129
RRM_8
Motif
Other DBs
NCBI-GeneID:
131300082
NCBI-ProteinID:
XP_058181732
LinkDB
All DBs
Position
9a:38622708..38627909
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AA seq
371 aa
AA seq
DB search
MRPVFCGNFDFEARQSDLERLFRKYGKVERVDMKSGFAFVYMEDERDAEDAIRGLDRFEF
GRKGRRLRVEWTKQERGIRRPVDSRRSSTNSRPSKTLFVINFDPYHTRTRDLEKHFDPYG
KILNVRIRKNFAFIQFESEEDARRALEATNMSKLMDRVISVEFAIKDDDDRRNGYSPDRG
RDRSPGRRAQDRGRSPSPYRRERASPDYGRGRSPSPYRKDRASPDYGRGGPTTSPRKRER
GDSEYDHGRTRSPRRVRPSPDNHGREPNPRERVVSPDYGRGHNRSPKGERISPDDYRRSP
SPQRQKVSPDDYRRSPIPQREKASPDDYRRSPSPDAKHEMRDSPKFDEAEDSPTQERYGS
RSPVERERSRS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccgttttctgtggaaactttgactttgaggcacggcagtctgatctggagcga
ctctttaggaaatatggaaaggttgagagagttgatatgaagtctggatttgctttcgtt
tacatggaggatgagagagatgcagaggatgcgattcgaggtcttgaccgatttgaattt
ggtaggaaggggcgccgtcttcgtgtggaatggacaaagcaagaacgcggcattaggagg
cctgtggattctagaagatcttcgacgaattcgagaccctcgaagaccttgtttgtgatt
aattttgatccatatcatactaggacaagggacttggaaaagcactttgatccatacggg
aagatactgaacgtgaggataagaaagaattttgcattcattcaatttgaatcagaggag
gatgcccgccgggcattggaggctacaaacatgagcaagctgatggatcgtgttatttcg
gtggagtttgcaatcaaagacgatgatgataggcgaaatggatacagtcctgatagaggc
cgtgataggtcgcccggaaggagggctcaagacaggggacgatcacccagcccatatcgg
agagagagggctagtccagattatggccgtggccgtagcccaagtccctatcgcaaagac
cgggctagtcccgattatggtcgtggtggacccactacgagtccacgcaaaagggaaagg
ggtgattccgaatatgatcatggtcggacccgcagcccgcgaagagtgagacccagtcct
gataatcatggccgtgaacccaacccaagggagagggttgttagtcctgattatggtcgt
ggccacaaccgaagccctaaaggagagaggatcagtcctgatgactatcggcgtagccca
agcccacaaagacagaaggtcagtccagatgactaccggcgtagcccaatcccacaaaga
gagaaggcaagtccagatgactaccggcgtagcccaagcccggatgccaagcatgaaatg
agggatagtccaaaatttgatgaagcagaagatagccccacgcaggagcgatatgggagt
cgttcacctgtggagcgggaaagatctcgttcttga
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