Rhododendron vialii: 131300175
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Entry
131300175 CDS
T09330
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
rvl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131300175
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
131300175
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131300175
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131300175
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131300175
03041 Spliceosome [BR:
rvl03041
]
131300175
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
131300175
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
131300175
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131300175
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131300175
Spliceosome [BR:
rvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131300175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
131300175
NCBI-ProteinID:
XP_058181873
LinkDB
All DBs
Position
9a:complement(36026998..36043313)
Genome browser
AA seq
308 aa
AA seq
DB search
MDPAVVDNIIERLIEVRLAKPGKLVQLTESEIKQLCVASRDIFMQQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPLANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFFDECKRRFNVKIWKSFTDCFNFLPVAALVDDRILCMHGGLSPDLANL
DQIRNLPRPTAVPDTGLLCDLLWSDPSRDVKGWGMNDRGVSYTFGPDKVSEFLAKHDLDL
VCRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGALMSVDENLMCSFQILKPAEKKS
KFMMSTKM
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgcagtggttgacaacataatcgaacggctaattgaagtccgattggcgaag
ccgggtaaactcgtccagctcaccgagtcggagatcaagcagctctgcgtagcttctcgt
gacatctttatgcaacagcccaatctcctcgaactcgaagctcccatcaaaatttgcggt
gacattcatggccaatacagtgatctattacggctatttgagtatgggggctttcctcct
ctagccaattatctattcctaggggactatgtagatcgagggaagcagagtttggagaca
atatgcctcttgctggcctataagatcaagtatcctgagaacttttttcttctcagagga
aaccatgaatgtgcttctatcaaccgcatatatggatttttcgatgaatgcaagcgccgg
tttaatgtgaaaatatggaagtccttcactgattgttttaattttcttcctgttgcggct
cttgttgatgacagaatattgtgcatgcatggtggtctgtcccctgatcttgcaaacttg
gatcaaattagaaacttaccccgtccaactgctgttccggacactggtttactatgtgat
ttactctggtcggatccctctagagatgtcaagggatgggggatgaatgatagaggagtt
tcatacacatttggcccagacaaggtgtcagaatttttggcgaagcatgatttggatctt
gtttgtcgcgctcatcaggttgtggaggacggttatgaattctttgctgaaaggcagctt
gtaaccgtattctcagccccaaactattgtggtgaattcgacaatgccggtgctctgatg
agtgttgatgagaacttgatgtgctccttccaaattcttaagcctgcagagaagaagtct
aagtttatgatgtccacaaaaatgtga
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