Rhododendron vialii: 131300332
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Entry
131300332 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131300332
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131300332
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Helicases
131300332
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
131300332
NCBI-ProteinID:
XP_058182088
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All DBs
Position
9a:complement(7578467..7598580)
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AA seq
824 aa
AA seq
DB search
MASEPPKKKPKKAKRARVDSEELERIDSLSWNPSLPQNDDPFSLFVGSDDNEGGFLTLEE
IDEAEYGLEIPKPERTNKKERPSKTAESRKRKRAKKKEIRSETTKSQERKQKEGVEGSSG
GAKAGSEEKVDEETKKEKKPKKRKKKKQKTKKKEEKQSEGSEKPATAAAAGTSDFKKDII
GDSVDEADYYAWNELRLHPLLMESIFRLRFKTPTPIQKACIPPAAHQGKDVIGAAETGSG
KTLAFGLPILQRLLEEQEKANNLVAEKGEAVEKIAPRSFLRALIITPTRELALQVTNHLK
EVAKGTNTRVVPIVGGMSTEKQERLLQERPEIVVGTPGRLWELMSGGEIHLIELHSLSFF
VLDEADRMIENGHFRELQSIIDILPMISASDEGHPQNTQNCTTVTSFQRKKRQTFVFSAT
LALSADFRQKLKRGSLKSKQSMNDELNSIETLSERAGMKANAAIVDLTNETVVADKLEET
FIECREEDKDAYLYYILTVHGHGRTMVFCTSIAALRHTSSLLRILGINVWTLHAQMQQRA
RLKAMDRFRGSEHGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASSDG
CSITLISPNDTSKFAALCKSFSKETFRRFPIELSYMPEIAKRLSLARQLDKSLRRDSQEK
ANKSWVKQNAESIELDMEDNESEEEQVINHKQKKANSYHLKRLRKELNMLLSRPLQPKAF
SQRFLAGAGVSPLLQHQFEELASQKLGDFTKVGNGERGKLLVIGQDFVEPLQALRNASHE
VMDLKESAGKRRNVENLKRKRKEEKKRLHDQRRKQKKRQKAGTE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaacctcccaagaagaaaccgaaaaaggcaaagcgcgccagagtggactca
gaagaactcgaacgaatcgactcactctcatggaacccctccctccctcagaacgacgac
cctttctctctctttgttggctcggacgataacgaaggaggttttttaacgcttgaggag
attgatgaagctgagtatggtttggaaattcctaaacctgagagaacaaacaagaaggaa
agaccaagcaaaactgcagagtcacgaaaaaggaagagagcaaaaaagaaggaaatacga
agcgaaactacgaagtcacaagaaaggaagcaaaaagaaggtgttgaagggtccagcggc
ggggctaaagctgggagcgaggaaaaggttgatgaagagactaagaaagagaagaagccg
aagaaaaggaagaagaagaagcagaagactaagaaaaaggaggagaagcaatccgaggga
agtgagaagcctgctactgctgctgctgctggcaccagtgacttcaaaaaagatatcata
ggagattcagttgatgaagctgactattatgcatggaatgaactgaggctccatccccta
cttatggaatcaatattcaggcttaggttcaaaacaccaacaccaatacaaaaagcttgc
attcctcctgctgctcatcaagggaaggatgtcatcggtgctgctgagacaggatctggg
aaaactcttgcttttggtttgcccattttgcaacgtctccttgaagaacaagaaaaagct
aataatctggtggcagagaagggagaagcagttgaaaaaattgctccaagaagtttccta
agggctctcatcataactcccacgagagagcttgcacttcaggttactaatcatcttaag
gaggttgcaaaaggtaccaatactagggtggtcccaattgttggcgggatgtcaacagaa
aagcaggaaaggcttctgcaagaaagacctgagattgttgttgggactccagggaggcta
tgggaacttatgtcaggtggagaaattcaccttattgagttacattcactgtctttcttt
gtgctggatgaggctgatcgaatgatagagaatggtcattttcgggagttgcagtccata
attgacatacttccaatgatcagtgcctcagacgaagggcatcctcagaatacacagaac
tgtacaacagtcacaagcttccagagaaagaaaagacaaacctttgtgttttctgcaact
ctagccctatcggctgatttccgtcaaaagctcaagcgaggatcactcaaatcaaagcaa
tcaatgaatgatgaattaaattctatagaaactctttctgaacgagctggaatgaaagcc
aatgctgctattgtcgatctgacaaatgaaacagttgtcgcagataagcttgaggagaca
tttattgaatgcagggaagaagacaaagatgcctatctatactacatattaactgtgcat
ggacacggccgcacaatggtgttctgtacatcaatcgcagctttacgccatacttcttcc
cttttgcgcattcttggaattaatgtttggacacttcatgctcagatgcagcagcgagct
cgcttgaaggcaatggaccgtttccgcggaagtgagcatggtatacttgttgctactgat
gttgcagcaagagggcttgatattccgggtgttcgaactgttgtccattaccaacttcca
cattcagcagaagtttatgttcacagaagtggaagaactgctagagcctcctctgatggg
tgtagcattacactaatctcacccaatgatacatctaaatttgctgctttgtgcaaatca
ttttcaaaggaaactttccggaggtttcccatagagctctcatatatgcctgagattgct
aaacgattatctcttgcacgtcaattagacaagagtttgcggagggactcccaggagaag
gcaaataaaagttgggtcaaacaaaatgctgaatcaattgaattagatatggaagacaat
gagagtgaggaggaacaagtgatcaatcataagcaaaagaaagccaattcctatcatctg
aagaggctgcgaaaggagctaaatatgctgctttcacggccgttgcaaccaaaagcattt
tcacaacgctttttagcgggggctggcgtttcacctcttctccaacaccagtttgaagaa
ttagcttcgcagaagcttggtgatttcacgaaagtggggaatggagaaagaggaaaatta
ttggttataggtcaggatttcgtggaaccacttcaggcgcttaggaatgccagtcacgag
gtcatggatctcaaagagtctgctggaaaacgaaggaatgtggaaaatttgaagagaaag
aggaaagaggagaaaaaacgtttgcacgaccaacggaggaagcagaagaaaagacaaaaa
gccggaactgagtag
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