Rhododendron vialii: 131300572
Help
Entry
131300572 CDS
T09330
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131300572
Membrane trafficking [BR:
rvl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
131300572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
131300572
NCBI-ProteinID:
XP_058182459
LinkDB
All DBs
Position
9a:complement(13077154..13112743)
Genome browser
AA seq
1852 aa
AA seq
DB search
MYAMENSSPNGNRFQKIPHRSFAANLNLNPLLDENLEQWPHLNELVQCYRTDWVKDENKY
GRYDSISPISFQNQIFEGPDTDIETEIHLASARQTKIDDATDDDIPSTSGRQFTDATISE
SLHSKVSKHLGESPLPAYEPVFDWENERSMIFGQRIPEAHIAQYGSGLKISVKVLSLSFQ
AGLVEPFYGTICLYNRERREKLSEDFIFRILPSEMQDANSSGESRGIFYLDAPSASVSLL
IQLEKPASEEGGVAPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNNIA
VASGGSASPSSPLAPSISGSTSQEGVSKSSAKITLDGKAGYSSGSSVVVEISNLNKVKEG
YTEDSLQDPKRKVHKPVKGVLRLEIEKLQAGPVDFENISESGSVTNDSVDTGDRTADGPF
TKCPSNGSDGSRTGDSKWNSFDGKEIHRNGLNAQSNPDISADDFQAFDFRTMSRNEPFLQ
LFHCLYVYPLTVTLSRKRNLFIRIEHRKDDADVRRQPLEAMHPREPGVLLQKWAQTQVAV
GARVACYHDEIKVSLPAIWTPLHHLLFTFYHVDLQTKLEAPKPVVIGYAALPLSTHAQLR
SEISLPIMKELVPHYLQETGKERLDYLEDGQNVFRLRLRLCSSLYPISERIRDFFLEYDR
HTLRTSPPWGSELLEAINSLKNVDSTALLQFLQPILNMLLHLIGNGGETLQVAAFRAMVN
ILTRVQQESVDEAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGP
VYDDVLAMAWFFLELVVKSMALEQIRLFYHNIPLGEDVPPMQLKEGVFRCIMQLYDCLLT
EVHERCKKGLSLAKRLNSSLAFFCYDLLSVIEPRQVFELVSLYLDKFSGVCQPVLHDCKL
TFLQILCDHDLFVEMPGRDPSDRNYLSSVLIQELFLTWDHDDLSQRAKAARILVFLLCKH
EFDARYQKPEDKLYIAQLYFPLVGQILDEMPVFYNLNAIEKREVLIVVLQIVRNLDDTSL
VKAWQQSIARTRLFFKLLEECLILFEHRKQADSMAVGSSSRSPVGDGTGPTSPKYSDRLS
PAINHYLTEASRQEVRPSGTPENGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASSQ
ALRESLHPILRQKLELWEENLSAAVSLQVLEITEKFSTTAASHSIATDYGKLDCITSIFT
SFFSRSQPLEFLKALFPVFNSVFNLHGATLMARENDRFLKQIAFHLLRLAVFRNDNIRKR
AVIGLQILVRSSFSHFMQTARLRVMLTITLSELLSDVQVTQMKSDGTLEESGEARRLRKS
LEEMADESKIHMLLRECGLPENALVAKSERSAEDQWSWSEVKYLSGNLLMALDASLEHAL
VTPVMNMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGV
VMQALVSRNDGVWSSDHVSALRKICPMVNSEITSEASAAEVEGYGASKLTVDSAVKYLQL
ANKLFSQAELYHFCASILELVIPVYKSRRAYGQLAKSHTMLTNIYESILEQESSPIPFTD
ATYYRVGFYGERFGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDANHTLHIIPDSRQ
VKADELQPGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNG
KTQGGLEDQWKRRTVLQTEGSFPALVNRLFVTKSESLEFSPVENAIGMIETRTAALRNEL
EEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAA
LLEFMAVCKRAIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccatggaaaattcatcccccaatgggaatcgttttcagaaaatacctcatcgc
tcgtttgctgctaatctgaacttgaacccattgcttgatgaaaatttggagcagtggcca
catctgaacgaacttgttcaatgctacaggactgactgggtaaaggatgaaaacaaatat
ggacgctatgatagcattagccccatttcatttcagaatcagatatttgaggggcctgat
actgatattgaaacagaaattcatcttgccagtgccaggcagactaagattgatgatgct
actgatgatgacatccccagcacctcagggaggcagtttacagatgctaccatctctgaa
tcactgcattcaaaagtttcaaagcatctgggtgaatctcctctccctgcttatgaacct
gtttttgattgggaaaatgaaaggtcaatgatatttgggcaaagaattccagaagctcat
attgctcagtatggcagtggattgaagatctccgtgaaagtcttatccttatcttttcaa
gcaggactagttgagccgttttatgggacaatttgtttatacaatcgggagagaagagag
aaattatcagaggatttcatcttccgaatattaccatctgaaatgcaggatgccaatagt
tccggtgagtcacgtggtattttctatttggatgctccatcagcatcagtttctctgctg
attcagttggagaagcctgcctctgaagaaggtggagttgctccctcagtctattcacgt
aaagagccagttcacttaaccgagagagaaaagcagaaacttcaagtgtggtctcgaatc
atgccttatagagagtcttttgcctgggcaattgttccactgtttgacaacaacattgct
gtggcttctggtgggtcagcttctcccagtagtcctctggctcctagcatctctgggtca
acttcccaagaaggtgtctctaaatcaagtgcgaagatcaccttggacgggaaggcaggt
tactcaagtggaagctctgttgttgttgaaatatcaaacttgaacaaagttaaagaaggc
tatacagaggactcactccaggatcccaaacgcaaggtgcataaaccagtgaaaggagtc
ttacgattggaaattgaaaagctccaagctggacctgttgactttgaaaatatttcagaa
agtggcagtgttaccaatgattctgttgacactggtgaccgaacagctgatggccccttt
acaaaatgccctagtaatggttctgatgggtctcgtacaggtgattccaagtggaactca
tttgacggaaaggaaatccatcgaaatggattgaatgctcaatcgaatccagatatcagc
gctgatgatttccaggctttcgacttccggacgatgtcaagaaatgagcctttcttgcag
ctttttcattgcctttatgtgtatccattgacagttactttgagtaggaaaaggaatttg
ttcatacggattgaacacagaaaggatgatgcagatgttcgcaggcagcctttggaggca
atgcatccaagggaaccaggtgtgttgcttcaaaaatgggctcagacacaagttgctgtt
ggggctagggttgcttgctaccatgatgaaattaaagtctccctccctgctatttggaca
ccgttgcatcaccttttattcactttctatcatgttgaccttcaaacaaaactggaagct
ccaaagccagtggtaattggttatgcagcgctgccattgtccacgcatgcccaattgaga
tctgaaatttctttaccaattatgaaagagctggttccacattatcttcaggaaactggc
aaggagaggctggattacttggaggatggacagaatgtcttcagattgcggttacgactg
tgctcttcattatatcccattagtgagcgcattagagatttttttcttgagtacgacagg
cacactcttcgcacaagtcctccctgggggtctgaacttttagaggcaatcaacagtttg
aagaatgttgattccactgctctgcttcagtttcttcagccaatcttgaatatgcttctc
catcttataggcaatggtggagaaactcttcaggtagctgcgtttagagccatggttaac
attttgacaagggtgcagcaggagtcggttgatgaagctgaaaggaatcgttttctcgtg
aactatgttgattatgcttttgatgattttggaggtcgtcaaccaccagtttatcctggt
ttatccactgtgtggggcagtttggctcgcagtaaggccaaaggttatcgggtagggcct
gtatacgatgatgtcttggcaatggcttggtttttcctcgaattagttgtgaaatcaatg
gctttggagcaaattcggctgttctatcacaacattcctcttggtgaagatgttccacca
atgcagttgaaagaaggtgttttcagatgcataatgcaattgtatgattgccttctaaca
gaagtacatgagcgttgcaagaagggattgagcttggctaagcgtttgaatagcagcttg
gcattcttttgctacgatcttttgtctgttatcgagcctcgccaagtttttgaattggta
tctttgtacttagataagttctcaggggtatgtcaacctgttctgcacgactgcaagcta
acatttctccagatcttatgcgatcatgatctgtttgtggaaatgcctggacgagatcca
tcagataggaactacctttcatctgtcttaatacaagagcttttccttacttgggatcat
gatgacttgtctcagcgcgcgaaagcagctagaatcttggtctttcttctgtgcaagcac
gagtttgatgctcgataccaaaaaccggaagataaactgtatatagctcagctatatttc
ccactagttggccagattctagatgaaatgcccgtcttctataacctgaatgccattgaa
aagcgtgaagtcttaatagttgttttgcaaattgtccgcaatctggatgacacatcgctt
gtgaaggcttggcagcaaagcattgctcgaaccagattgtttttcaagctcttggaggag
tgccttattctatttgagcacagaaaacaagctgatagcatggctgtgggaagtagttcc
cgcagcccagttggggatggaactggacccacgtcccctaagtactctgatagactttct
cctgcaattaaccactatctgaccgaggcttcacggcaagaagtcagaccttcaggaacc
cctgagaatggttacttgtggcagagagtcaattcccagctcagctctcctagccagcca
tattccttaagagaagctcttgcccaagcacaatcgtcaaggattggagcttcttcccaa
gcactaagagaatcattgcaccctatattgaggcaaaaactggaactctgggaagaaaac
ttgagtgctgctgtcagtcttcaggttttggaaataaccgagaagttttcgacaacagca
gcatctcatagcattgctactgattatggaaaacttgattgcatcacatccatatttacg
agcttcttctcacgaagtcagcccttggagtttttgaaagctttgtttcccgtgttcaac
agcgtattcaatcttcatggagcaacactaatggcaagggaaaatgatcgtttcttaaaa
caaattgctttccatcttctccggcttgcagttttcagaaacgataacattagaaaaagg
gctgttattggactacagatacttgtccggagctcgttctctcactttatgcagacagca
aggttaagagtgatgctgactattacattgtcagagttgttgtctgatgtgcaagtgact
cagatgaagtctgatgggacacttgaagaaagtggtgaagctcggcgtctccgtaagtct
ttggaggaaatggcagatgaatctaagatccatatgctgttaagggagtgtggacttcct
gaaaatgcacttgttgcaaaatcagaaaggtcagcagaggaccagtggtcatggtcagag
gtgaaatatctctctggcaatctccttatggctctggacgcgagcctggaacacgccctt
gtgacacctgtgatgaacatggatagatatgcagctgcagagagcttctataaactggca
atggcatttgctccagtcccagatcttcacataatgtggcttttgcatctatgtgatgcc
catcaggagatgcaatcttgggctgaagctgcacaatgtgccgttgctgttgccggtgtc
gtgatgcaggcccttgtaagcagaaatgatggtgtctggagcagtgatcatgtatctgct
ttacgtaaaatatgccctatggtaaacagtgaaattacgtctgaagcctcggctgccgag
gtagaaggatatggtgcttcaaaactcacagtcgactctgctgtaaaatacttgcagctt
gcaaataagcttttctctcaagcggaactttaccatttttgtgcgagtattctcgaactt
gttattccagtttacaagagcaggagggcatacgggcagctagcaaaatcgcacacaatg
ctaaccaatatatatgaatcaatacttgaacaggaatcaagccccataccattcacagat
gccacgtattatagggtgggattctacggtgaaaggtttggaaaactagatagaaaggaa
tatgtatatcgagagccacgggatgtaaggttaggggacataatggagaaacttagtcat
atatatgagtcaaggatggacgcaaatcacactttgcatataattccagattctagacaa
gtcaaagcagatgaattgcaacccggagtttgctacctccaaataactgctgttgatcca
gtcatggaagatgaagatttaggaagcagaagggagagaatattttccctctccactgga
agcgtccgtgcacgtgtctttgaccgtttcttgtttgatactccatttaccaaaaatgga
aagacccaaggtgggttggaagatcaatggaagcggcgaacagttttgcagactgagggg
tctttccctgccttagtgaatcgactatttgtaactaaatctgaatctcttgagttttct
ccggtggaaaatgctattggaatgattgaaactcggacggctgcattacgaaatgagctt
gaagagcctcgtagctcagaaggtgaccaactcccacgtctccagagtcttcagagaata
cttcaaggctctgttgcagttcaagtcaacagtggagtcttgagtgtgtgcacagctttc
ctgtccggtgagccggcgacaaggttgcgttctcaggagctgcagcaactcatagccgca
cttcttgaatttatggcagtgtgcaaacgtgccataagggtgcactttaggcttattggg
gaagaagaccaggaattccacacccagcttgtcaacgggtttcaatcactcaccgcagag
ctatctcactacattcctgccattctctccgagctctga
DBGET
integrated database retrieval system
