KEGG   Rhododendron vialii: 131300670
Entry
131300670         CDS       T09330                                 
Name
(RefSeq) uncharacterized protein LOC131300670
  KO
K12857  Prp8 binding protein
Organism
rvl  Rhododendron vialii
Pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131300670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rvl03041]
    131300670
Spliceosome [BR:rvl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    131300670
 Complex C
   U5 SnRNP specific factors
    131300670
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR41 NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Tricorn_2nd Beta-prop_HPS5 Beta-prop_DCAF12 eIF2A Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_Nup120_160 Nbas_N RMC1_N Beta-prop_AT5G49610-like PEP5_VPS11_N
Other DBs
NCBI-GeneID: 131300670
NCBI-ProteinID: XP_058182589
LinkDB
Position
9a:1257434..1260369
AA seq 347 aa
MMQPLPRDGESALSVVGPRPMEWSTVPYSAPPQPGANGKQQRTSSLESPIMLLTGHQSAV
YTMKFNPAGTIIASGSHDREIFLWNVHGECKNFMVLRGHKNAILDLQWTTDGSQIISASP
DKTLRAWDVETGKQVKKMAEHNEFVNSCCTSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT
FPDKYQITAVGFADASDKIYTGGIDNDIKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSY
LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRLV
YIWDTTSRRILYRLPGHSGSVNETVFHPTEPIIGSCSSDKQIFLGEV
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgatgcaaccattaccgagagatggtgaaagtgctctgtcagtagtcggtccaaggcca
atggaatggtccactgttccttacagtgctcctccacagcctggggcaaacggaaagcaa
cagcggacatcaagtttggaatcgccaatcatgctgttaacaggccatcagagtgctgta
tacacgatgaagttcaatccggcaggaacaatcatcgcatctgggtctcacgacagggag
atattcctctggaacgtgcacggggaatgcaagaacttcatggtgttgagagggcacaaa
aacgccatcttggatctccagtggaccactgatgggtcccagataatatccgccagtcct
gacaagacccttagggcatgggacgtagaaaccgggaaacaggtcaagaaaatggcggaa
cacaacgaattcgtgaactcatgctgtacttcccgtcggggtccacctcttgtagtcagc
ggatctgacgatgggactgcaaagctctgggatatgcgtcagaggggtgcaatccaaact
tttccagacaagtaccaaatcacagccgttggttttgccgacgcatcagataaaatctac
accggcgggatagataacgatataaaggtgtgggatttgcggaggaacgaggtgaccatg
actcttcaaggacatcaggatatgataaccggaatgcagttgagtccggacgggtcctac
cttctaaccaatggcatggattgcaagctctgtatctgggatatgcgaccgtacgctccg
cagaatcgttgtgttaagattttggaaggtcaccagcacaactttgagaagaacttgttg
aaatgcgggtggtcgccggatgggagtaaggtcacggctggtagttctgatcggttggtg
tatatttgggatacaacttctcggcgcatcttgtacaggctaccagggcactcgggatct
gtgaatgaaactgtgttccatcccactgaaccaatcattggatcttgtagtagcgacaag
cagatttttcttggggaagtttaa

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