Rhododendron vialii: 131301021
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Entry
131301021 CDS
T09330
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131301021
04121 Ubiquitin system [BR:
rvl04121
]
131301021
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131301021
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131301021
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131301021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
HypA
Motif
Other DBs
NCBI-GeneID:
131301021
NCBI-ProteinID:
XP_058183131
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All DBs
Position
1a:37723470..37726976
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AA seq
290 aa
AA seq
DB search
MSSGGNTHWCHQCSQPVQLRGRNSVCPHCNGGFVEELDEAVGTRHQDFAGLHSDDGSNFA
LMERFSDPRFEIMDAFAAIMRQRMAGRNPNFENRPRSDLGSEQRMAFGSGPWLIFQGQAP
VRISDNDGFEFFFNGSPRTGQRPANFGEFFAGPGLEELIEQLTMNDRQGPPPAPRSSIDA
MPTVKIAQKHLNTDSHCPVCKDKFELGCEAKQMPCEHIYHSDCIVPWLVQHNSCPVCRLE
LPPLGSANAQTNRRASGGNGSTSSVGNSSSRENGGSNQGRRNPFSFLWPF
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtggcgggaacacacattggtgtcatcaatgtagtcagccagttcagcttcga
ggccgtaactcggtttgcccacactgcaatgggggctttgtagaggaacttgatgaggcg
gtgggcaccagacaccaggatttcgcagggctccattctgatgatggatccaactttgca
ttaatggaacgcttctctgatccaagatttgagattatggatgcatttgcggctattatg
aggcagagaatggctggacgaaaccctaattttgaaaataggccgagatctgatcttggt
tctgaacaacgtatggcctttggttctggtccatggttgatatttcaaggccaagcccct
gttagaatatcagacaatgatgggtttgagtttttctttaatggcagtccaagaactgga
cagaggccagctaatttcggtgagtttttcgcggggcctggattggaagaactgattgaa
cagctcactatgaacgataggcaaggtccacctccagcgcctcgttcatcaattgatgca
atgcccaccgttaagatcgcccagaagcatctcaacactgattcccactgcccagtttgt
aaagataagtttgagttgggttgtgaagcgaagcagatgccttgtgagcatatctatcat
tccgactgtatcgttccttggttggttcagcacaactcatgcccagtgtgccgcctggag
ctgccgccacttggttctgccaatgctcaaactaatcgaagagcaagtggcgggaacgga
agcacaagtagtgtgggaaacagcagcagtagggaaaatggtggatcgaatcaggggagg
aggaatccgttttcatttctgtggcctttttga
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integrated database retrieval system
