Rhododendron vialii: 131301061
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Entry
131301061 CDS
T09330
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131301061
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131301061
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
131301061
NCBI-ProteinID:
XP_058183161
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Position
9a:30899084..30916475
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AA seq
1200 aa
AA seq
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MFYSQFILAKKGTLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDSDILQGNYVDHHVSTREQITLQDTMEGVVYSTSKFGLDERFGDGDASGLDLDEEIFL
NKVAASGHAGVMLASDAVPCASAQSMSPLEEDEIDGGINGNSKVMVATERIDGLAENTDG
IEYAQAPCTPGLVEEPNLSKTQEASAGDDQLELVEELNFSNVQEASVCDYDPESENHHIT
NFAAKEDMTSITSNPDNQLKSQGDSPSTAGNSVLAEAVRAISPGSEFSYRNHTASDSVNG
LQQNGVDSNNELGSRSNDGTQTDLVELRVSLDETSCPNLSNEVHVVENNCGKSCISTTCQ
PVSEYVTKTNQAVVRPEVPNNEVNAGNMEEQCPTNIDEKLAAADIHVLQPCKHLNQLSTL
NFESDVSAGPLLPSDVSGLCSFEISGGKEATHASGVSTNVEGEGCFTKHHLEENKTTEPA
SSAEIQADINKHTDQDVDVILGDGKIDSIAGSEKFELPAPEKLLSVPEGFADLQDNFMES
TPDGAHLLSGGGDDAGININSQKKRSFTESTLTVQSLDSVESLAGARSKRTKEYIPDDDD
LLASILVGRRSSVLKIMPTPTPQPQVTRMKRQQSAPRVSASKRKILMDDAMILHGDVIRQ
QLTSTEDIRRTRKKAPCTRPEIWMIQKEFLEDEIFSEPIFTGFCGGLALLHSQTYDLSEI
VISQIDAHNPFLEAATKEHVAVLEDVTNPFEVATNMGFSVGPNVHNDAGMDGTNECLVGG
NHVQAAHPENQQAEDHVLRLQGYDTPLQMEAICDVPVPDAVNPGIDFVFESASSPNFGFG
YENNVSADSALRSALFDKAEENNDSAVVGTAEARVRDELLEGTEVGLGSSVDMQTACGAN
PSLATSAETGLPSDQVTVTIGTVEEVSRNEHRSLPNEDEVLVPELGYDMGKNLTSYGSNE
ELKLASSYPVELNVDVNNISSNDGEYPGPPPGYWEADPHCTMEADISVAAHTATVDCSDM
EYAVDWHDTGFLNADDEDYAEDEECMPSAEQTSFLENSGWSSRSRAVAKYLQLLFEKEAE
HGRKVLPMDNLLVGKTRKEASRMFFEALVLKTRDYIHVEQEAPFGDINIKPRVMLMKSDL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgttctactcgcagtttatactcgcgaaaaagggcacgcttgggacgatatggattgct
gctcacttggagcggaagctacgcaagaaccaggtcgctgataccgatattggtgtctcc
gttgattcaattctttttcctgatgtaccaattgcactgcggttgtcgagccatcttttg
cttggcgtggtgagaatatattccagaaaggtgaattacctttttgatgattgcagtgag
gccttgctcaaggtaaagcaagcttttcgctcaactgctgtcgatttaccacctgaagaa
tctactgcaccgtatcactcgataacgttgcctgagactttcgatctcgatgattttgag
ctgccggatagtgacattcttcagggcaactatgttgatcatcatgtcagtacgagggag
cagattacattgcaagatacgatggaaggagtggtttactccacatccaagtttggatta
gatgagcgatttggggatggtgatgcttccgggttagaccttgatgaggaaatatttctg
aacaaggttgcagcttctggacatgctggagttatgctggcttcagatgctgtgccttgt
gcatctgctcaatcaatgagccctcttgaggaagatgaaatcgatgggggaatcaatgga
aactctaaggtgatggttgctactgaacgaattgatggtcttgctgagaatactgatggc
atcgagtatgctcaggctccgtgcactccaggattggtggaagagccaaacttgtccaaa
actcaagaggcttcagcaggtgatgatcaactggaattggtggaagagctgaatttctcc
aatgttcaggaggcttcagtatgtgattatgatccagaatcagaaaatcaccatataacc
aactttgcagctaaagaggacatgacaagcattaccagtaacccagataaccaattaaag
tcacagggagattcgccgtctactgctgggaattctgttttggctgaagcagttagagcc
atttctccaggttctgaattttcatataggaaccatactgcatctgacagtgtaaatggg
ttgcaacagaatggagttgacagcaacaatgagcttggtagtcgctccaatgatgggacc
caaacagaccttgtagaactccgagttagtttggatgaaacgtcatgtcctaatttgtct
aatgaagtgcatgttgtggagaataattgcgggaagtcttgcatatccaccacctgccag
cctgtgtcagaatatgttacaaaaactaatcaagcagtagttaggccagaagttccgaat
aatgaggtgaatgcaggaaacatggaagaacaatgccccactaacattgatgaaaaactg
gcagctgctgatattcatgttcttcagccatgcaagcatctgaaccaattgagtacatta
aattttgaaagtgatgtctcagctggtcctctcttgccatctgatgtttcagggctatgc
tcatttgagatatctggagggaaggaggcaactcatgcttctggagtttccactaatgtt
gaaggtgaagggtgtttcacgaaacatcacttggaggaaaacaaaacaacggaacctgct
tcaagtgcagagattcaggcggacattaacaaacatactgatcaagatgtggacgtgatt
ttaggtgatggtaaaatagatagtatagctgggtctgagaaatttgaattacctgcaccg
gaaaagttgctatctgtcccagaagggtttgctgatctacaggataatttcatggagtcc
acacctgacggagcacacttgttgtctggtggtggtgatgatgctgggatcaacataaat
tcccaaaaaaagcgcagtttcaccgaaagtactctgactgtgcagagtctagattcagtt
gaatctttggcgggtgcccgatctaaaagaaccaaggaatatatccctgatgacgacgat
ttattggcctccattctagttggaagaagatcttcagttctgaaaattatgcccacacct
actcctcaaccgcaggtaacacgaatgaaacgccagcagtctgcaccccgggtttctgct
tcaaagaggaagattcttatggacgatgccatgattttgcatggcgatgttatacggcaa
cagttgactagtactgaggacatacgtcgcacacggaagaaagctccttgcacccgtcct
gaaatttggatgattcagaaagagttcttggaagatgaaatattcagtgaacctatattc
acaggtttttgtggaggattggctttgttgcacagtcaaacatatgatctgagtgaaatc
gtgatatcccaaattgatgcacataatccttttctcgaagctgcaacaaaggaacacgtg
gctgtactagaagatgtaactaatccctttgaagtagcaactaatatggggttctcagtg
gggccgaatgtccacaacgatgctggaatggatgggaccaatgagtgccttgtaggcgga
aatcatgtgcaagcagcgcatcctgagaatcaacaggctgaagaccacgtcttacgattg
cagggttatgacacacctttgcagatggaggctatttgtgatgttccagttcctgatgct
gtaaatcctggcattgattttgtctttgaatcagcttcctctcccaattttggttttggt
tatgaaaataacgtttcagccgactctgcgcttcgatcagctttgtttgacaaggcagag
gaaaataatgactctgctgtcgttggaacagcagaggccagagtgagggatgaattgttg
gaaggaactgaagttggtttaggaagtagcgtcgacatgcaaactgcctgtggagcaaat
ccttctcttgcaacttctgcagagactggtttgcctagtgaccaggtgactgtaactatt
ggcactgtcgaggaagtaagtcgaaacgagcacagaagtcttccaaatgaagatgaggtt
cttgttccagagttgggctatgacatgggcaagaacctgacctcttatggttctaatgaa
gaactaaaacttgcttcttcatatccggtggaactcaatgtagatgtgaataatatctcc
tcaaatgacggtgaatatcccgggcctcctcctggctattgggaagctgatccacactgc
acaatggaagcagatatttctgttgctgcccatactgccactgttgattgcagcgatatg
gaatatgcagtagattggcatgatacagggtttctaaatgctgatgatgaggactatgct
gaggacgaagagtgtatgccaagtgcagagcaaaccagcttcctggagaacagcggatgg
tcttcccgcagcagggcggttgccaagtaccttcaactcttgtttgagaaggaagcagag
catggaaggaaggttcttcccatggacaacctgttggtaggaaaaactcgtaaggaggca
tcgaggatgttttttgaagcattggttcttaaaactagagattacatccatgtagagcag
gaagcccctttcggagacataaatataaagcctcgagtaatgctcatgaaatcggacttg
tga
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