Rhododendron vialii: 131301119
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Entry
131301119 CDS
T09330
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvl03000
]
131301119
03036 Chromosome and associated proteins [BR:
rvl03036
]
131301119
Transcription factors [BR:
rvl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131301119
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131301119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Helicase_C_2
YlbD_coat
Oxidored_nitro
N36
Motif
Other DBs
NCBI-GeneID:
131301119
NCBI-ProteinID:
XP_058183257
LinkDB
All DBs
Position
9a:31635817..31665596
Genome browser
AA seq
1454 aa
AA seq
DB search
MEEKDGEVDDIESASSDSFIDDSDDDGPSISAEDDGLHFEVNLTEEEIEELISELLEVES
KAAEAQESLEDESLEKVEDEVRQELAQSLHGEDLEKAVSDEMETFREDWEAVLDGLEKES
AHLLEQLDGAGVELPSLFKWIESQAPNGCSTEAWRKRTHWVGSQVTNDVTEFVSDAEKFL
QSNRPIRRKHGKILEEGASGYLGKKLCIDDSKEATTEKSDVDWSSFNQIISARSSEELTS
FGSKNWASVYFASTPQQAAELGLKFPGVDEVEEIDDIDGSNCDPMVADALANEREAGLSE
AQKKNFKKVKEEDDANFDLKLQRNLNRRRQRNRCKQEAIEREFLPADKQMEISSDADLDV
DSESNKIEMMGQNLRTGVHENIEVSDDHEKGKSKTNGSSSVCSDSCLPDESETRGTKRSH
DSEELEVDNKKTRPVVIDIDDTAHTPLKSLNGIFRCTVCDKLAAEVLPHPHPLLKVIVCR
DCKCFIEEKMHLQDPDCSECYCGWCGGNKDFVSCRSCKMLFCNSCLKRNLGEECLLKVQL
SGWQCCCCSPSVLQQLTLQLEKAIGSIVPMISSSDSDSDSSDADITVSISTKRKRKKKIR
RILDDAELGEETKKKIAIEKERQDRLKSMEAQVKSKSVLMSSMNFSGNLSEGCSVEVLGD
ALTGYIVNVVREKGEEPVRIPPSMSGKLKGHQVAGIRFMWENIIQSITKVKSGDKGLGCI
LAHTMGLGKTFQVIAFLYSAMRSVDLGLKTALIVTPVTVLHNWRSEFSKWSPLELKPLRI
FMLGDVSRERRAEYFAKWRAKGGVFLIGYSAFRNLSLGKHLKDSHVAREICYALQDGPDI
LVCDEAHTIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE
FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI
AVKLSPLQRKLYRRCLDVHGNVSGEKLPKRSFFAGYQALAQIWNHPGVLLLMKGCKDYRK
REDAVENLLPDDSSSDENIDCNMVTGEKLRKNEFQQRKTNTGSFDEDWWSDLLQEKNHKE
VEHGGKMVLLLDILTMSSNVGDKTLVFSQSLSTLDMIEHFLSKLPRQGKIGKCWRREKDW
YRLDGRMEASERQKLVERFNEPSNKRVKCTLISTKAGSLGINLYAANRVIIVDGAWNPTY
DLQAIFRAWRYGQTKPVFAYRLMAQGTMEEKIYKRQVTKEGLAARVVDRQQVYRTMSKEE
MLHLFDFSDDESDSLPELVEENGHSIKQSTGGQVGIFQKQKLPLPDGTCSSDKFMEGLLS
RHYPRWIANYHEHESLLQENEDEKLSKEEQDMAWDVYRRTLQWEEVPRVPLDESAVERKQ
DVPNVPTPVPDTINKTILPKGRLRNRVMQRKCTNLAHLLTLRSQGTKTGCSTVCGECAQE
ISWENLNRDGKSVR
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaggatggggaagtggatgacattgagagtgcaagtagcgattcttttatt
gatgattcagatgatgatggaccttcaatatctgcagaagatgatggattgcattttgag
gttaatttgactgaggaagaaatagaagagctaatttctgaacttttagaagttgagagc
aaggctgctgaggcccaagaatcactcgaagatgagtcactagaaaaagtggaggatgaa
gttcggcaagaattggcgcaatctctgcatggagaagacctcgagaaagctgtttctgat
gaaatggaaacttttagggaagactgggaagctgtacttgatgggcttgagaaagagagt
gctcacttgttggagcaactcgatggtgctggtgttgaactcccgagtctgtttaagtgg
attgaaagccaggctcctaatggttgctccactgaagcttggagaaaaaggactcactgg
gttggatctcaggtcaccaatgatgtgactgaatttgtatcggatgctgaaaagtttctt
cagagcaacaggcctataagaaggaaacatggcaaaatactggaggagggtgccagtggt
tacttggggaagaaactttgtatcgatgatagcaaggaagctacaactgaaaaatctgat
gtggattggagctctttcaaccaaataatttctgctcgttcatctgaggagcttacatca
tttggcagcaagaattgggcttctgtttactttgctagtactccacaacaagctgcagaa
ttagggctcaaatttcctggagttgacgaggtggaggaaatcgatgacattgatggcagc
aactgtgatccaatggttgcagatgccctagctaatgaaagagaagcaggtctttcggag
gcacaaaagaaaaactttaagaaggtcaaagaggaagatgatgcaaattttgacctgaag
cttcagcgtaatttgaatcgaaggagacagagaaacagatgcaaacaggaggccatagag
agagaatttttgccagcagataagcagatggaaattagttcagatgcggatctggatgtt
gatagtgagagtaataagattgaaatgatgggtcagaatttgaggactggcgtgcatgaa
aatattgaagtttctgatgatcatgagaagggaaaatcaaagactaacggtagctcttca
gtgtgttctgattcctgtttgcctgacgaaagtgaaaccagagggaccaagcgttcacat
gacagtgaggaactagaggttgataataagaagactcgccccgttgttattgacattgac
gatacagctcatactcccttaaagagtttgaatgggatcttccgctgcactgtttgtgat
aaactagcagctgaagtactaccacatccacatccacttctaaaagtaattgtctgcagg
gattgcaaatgttttattgaagaaaagatgcatctacaggatcctgattgttcggagtgt
tattgtggatggtgtggagggaacaaggactttgtgagttgcaggtcatgtaaaatgtta
ttttgtaactcctgtttgaagaggaatttaggcgaagaatgcttgttaaaagtccagttg
tctggttggcaatgttgttgctgctctccaagtgttctccagcagttgactctacagttg
gagaaagctattggatctatagttcccatgatttctagctctgacagtgattcggattct
tctgatgcagatatcactgtttctatcagcaccaaaagaaaacgaaaaaagaaaatccgg
agaatccttgacgatgctgaactaggggaagagacgaaaaagaaaattgcaattgaaaag
gagcgccaagaccgcctgaagtctatggaagcacaggttaaaagcaaatcggtgcttatg
agttctatgaactttagtggcaacttatctgaaggttgtagtgttgaagtcctgggtgat
gctctcacgggttatatagtgaatgttgtgagggaaaagggtgaagagcctgtgcgtatt
cctccgagcatgtcaggaaaactaaaaggccatcaggttgcagggatacgatttatgtgg
gagaatattatccagtcaattacaaaagtgaagtccggtgataagggtctcggatgtatt
ctagctcataccatgggccttggtaaaacttttcaggtcatagctttcttgtatagtgct
atgagaagtgtggatttaggattgaaaactgcactaattgtgacaccagttactgttttg
cacaactggcgaagcgaattttcgaagtggagccctttagagttgaaaccgcttcgcatc
ttcatgctgggagatgtttcaagggagagaagggctgagtattttgcgaaatggagggcc
aagggtggtgtcttcttgattggatattctgcatttaggaatctctccctcggaaagcat
ttgaaggatagtcacgtggccagagaaatttgttacgcgcttcaggatggacctgatata
ctagtttgtgatgaggcccatacaatcaagaacaccaaggccgatgtaacccaggccttg
aaacaagttaaatgtcaaaggaggattgcattaactggttcacctcttcagaacaaccta
atggaatattattgtatggttgattttgtcagagaaggatttcttgggagcagccatgag
tttagaaaccgctttcaaaatcccattgagaatggacaacataccaattcaacatctgaa
gatgtgaaaattatgaaccaaagatctcatatcctctatgaacagttgaaaggttttgtc
cagagaatggacatgaatgtggttaagaaggacttgcccccgaaaactgttttcgtaata
gctgtaaagctttctcccttacaaaggaagttatacagaagatgccttgatgtgcatggg
aatgtttctggtgaaaagttaccgaagagaagtttttttgcaggttaccaggccttagca
cagatatggaaccatcctggggttttgctcctaatgaaaggttgcaaagactacagaaaa
cgtgaagatgctgttgagaatttgcttccagatgatagttctagtgatgagaacatagat
tgtaacatggttacaggagagaaactgaggaagaatgagtttcagcagagaaaaaccaat
actggctcttttgatgaggattggtggagtgatcttcttcaggaaaagaaccacaaggag
gttgaacacggtggtaaaatggttttgctgcttgatatccttacgatgagctccaatgtg
ggcgataaaacactagtttttagccagagtttatcaactctagatatgatagagcatttt
ctctcaaaattgcctcggcaagggaaaatagggaaatgctggcgacgagaaaaagactgg
tataggctagatggaagaatggaggcctctgaaaggcaaaaactggttgagaggttcaat
gagccctcaaataaaagggtaaaatgcactctgatatcaactaaagctgggtctctaggg
atcaacctctatgcggccaaccgcgtaatcatcgttgatggtgcgtggaacccaacatac
gatcttcaggctatatttagggcttggaggtatggccaaacaaagcctgtgtttgcttac
cgactgatggcacagggaacgatggaagaaaagatatacaagcgtcaggtaactaaggag
gggcttgcagctagggtggttgacaggcagcaagtttacaggactatgtctaaagaggag
atgttacatctctttgactttagtgatgatgaatctgattctttgcctgagcttgtagaa
gagaatggacattcaattaaacaaagcactggtggccaagttggaatctttcaaaagcag
aagctgcctcttcctgacggaacttgttcttcggacaagttcatggaaggtttgctaagc
agacattatccgagatggattgcaaattaccatgagcatgagtctcttttgcaagagaat
gaagacgaaaagctatcaaaagaggaacaagacatggcgtgggacgtgtatcggagaact
ctacaatgggaggaggtgccacgggttccgcttgatgaatctgcagttgagcgaaagcaa
gatgttccaaatgtacccactcctgttccagataccatcaacaaaaccatactacccaag
ggcagattgagaaatcgggtgatgcaacggaagtgcactaacctagcacacttgttgact
ctaaggagtcagggcacaaaaaccggttgcagtactgtgtgtggggaatgtgctcaggag
ataagctgggagaacttgaatagggatggaaaatcggtaaggtga
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