Rhododendron vialii: 131301218
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Entry
131301218 CDS
T09330
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131301218
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rvl01002
]
131301218
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131301218
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131301218
Peptidases and inhibitors [BR:
rvl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131301218
Ubiquitin system [BR:
rvl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131301218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
131301218
NCBI-ProteinID:
XP_058183374
LinkDB
All DBs
Position
9a:complement(33340533..33369363)
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AA seq
1118 aa
AA seq
DB search
MTLMTPSPLDQQDDDEMLVPHSDFAPVEGPQPMEVAPSETANPVDAQSVDDTPSARFTWT
IENFTRLNTKKLYSEIFYVGGYKWRVLIFPKGNNVEHLSMYLDVADSATLPYGWCRYAQF
SLSVINQVQTKYTVRKDTQHQFNARESDWGFTSFMPLVELYDPSRGYLVNDTILVEADVA
VRKVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSG
SIPLALQSLFYKLQHSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVEYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKED
IKRALEEQYGGEEELPQTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKVICNVDEKDIAE
HLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDEDLVQQIGRDIYFDLVDHDKARTFRI
QKQTLFSLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTTQEEAQSVGQLREVSN
KTNNAELKLFLEVEFGQDLQPIPPPVKSKEEILIFLKCYDPLKEELRYVGRLFVKANGKP
AEVLTKLNELAGFATDEEIELFEEIKFEPTVMCEHIDKKLTFRGSQLEDGDIICFQKSTQ
VESSEQCRYPDVPAFLEYVHNRQVVRFRSLEKPKEEEFRLELSKLHNYDDVVERVACHLG
LDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTTDIMYYEVLDIPLPELQG
LKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKTKVELSHPNAELRLLEVFYHKIY
KIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHIYHFTKDTAQNQVQVQNFGEP
FFLVIREGETLGEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQESDIISSRFQRRDV
YGAWEQYLGLEHSDNTPKRSYAASQNRHTYEKPVRIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactccttcacctttggatcagcaagatgacgacgagatgctcgtgccg
cattcggatttcgcccccgtggaaggtcctcaacccatggaagttgcaccatccgaaact
gccaatccagttgatgcccagtcggttgatgatactccatcagcgcggttcacgtggaca
attgaaaattttacgaggttgaatactaagaagctatactctgagattttctatgtggga
ggatacaaatggcgggtgcttatatttccgaagggaaacaacgtggaacatttgtcaatg
tatctggatgttgccgattcggcaactttgccgtatggctggtgtagatatgctcaattc
agtttatctgtgatcaatcaagttcaaaccaagtatacagtgaggaaagacacacaacac
cagttcaatgcacgagaaagtgattggggtttcacttctttcatgcctcttgttgaattg
tacgatcctagcagaggttatctggtgaatgatactattttagtagaagctgatgttgct
gttcgtaaagtcgttgattactggtcccatgactcaaaaaaggagactggatatgttggt
cttaaaaaccaaggagctacttgctacatgaactctctcctccagacattgtaccatatt
ccttatttcagaaaggctgtgtatcatatgccaacaactgagaatgatatgccatcaggg
agcatccctttggctttgcaaagtttattctataagcttcagcacagtgacactagtgtg
gcaacaaaagagttgacgaagtcttttggatgggatacatatgattcgttcatgcagcat
gatgtgcaagaactaaacagagtcctttgcgaaaagcttgaagacaagatgaagggaact
gttgtggagggtacaatacagcagttatttgaagggcaccatatgaattatatagagtgc
atcaatgtggaatacaaatccacaagaaaggaatcattttatgatcttcagctagatgtt
aaaggctgtcgtgatgtttatgcttcttttgacaagtatgtggaggtggaacgtcttgag
ggtgataacaaatatcacgctgaacaacatgggttacaggatgcaaggaagggtgtcttg
ttcattgacttccccccggtccttcaacttcagttaaaacggtttgaatatgattttatg
cgggataccatggtaaagataaatgaccgctatgagttccctctacaacttgatcttgat
agagagaatggtaaatatttgtcgcctgaagctgataggagcgttcgcaacttgtatact
cttcacagtgttttggtacacagtggtggggtgcatggtggacattattatgcttacatc
aggcccaccctttctgatcagtggtttaaatttgacgatgaacgggtaacaaaagaagat
ataaagagggcattggaggagcagtatggcggggaggaagagctaccacagactaacccg
gggttcaacaactctcctttcaagtttacaaagtactctaatgcatatatgcttgtgtat
atacgggaaagtgacaaggagaaagtgatatgtaatgtggatgagaaggacatagcagaa
caccttaggattaggttgaagaaagaacaagaagaaaaggagcaaaaaagaaaggaaaaa
gcagaggcacatctttataccatcataaaggttgctcgtgatgaggaccttgttcaacag
attggaagggatatatattttgatcttgtcgaccatgacaaagctcgtacttttcgtatt
cagaaacagacgcttttcagcctttttaaggaggaagttgccaaggagtttggtatccca
gtgcaatttcaacgcttctggctgtgggcaaagcgtcaaaatcatacataccgtccgaat
cgcccattgacaacacaagaggaagctcaatcggttggacaattgcgtgaggtatccaat
aagacgaacaatgcagaactaaaattgtttctggaagtggaatttggacaggatttgcag
cccattcctccaccagtgaagagtaaagaggagattcttatctttctgaaatgttatgac
ccgttgaaagaggagcttcggtacgttggccggctgtttgtgaaggccaatggtaagcca
gcagaagtattgacaaagctaaatgagttggctggattcgctactgatgaagaaattgaa
ctttttgaggaaataaaatttgaacctactgtcatgtgtgaacacattgataagaagctc
acatttcgtggtagtcagcttgaagatggagacataatatgttttcagaaatccactcaa
gttgaaagcagtgaacaatgccgctatcctgacgttcctgcatttctggaatatgtgcat
aatcgacaggttgttcgcttccgttctttggagaaaccaaaggaagaggagttccgtctc
gagttgtcaaaactgcacaattatgacgatgttgttgaaagagttgcctgccatcttggg
ctggatgatccgtctaaaataaggcttacatctcataactgctactcccagcaacctaaa
ccccagccgatcaagtatcgaggagtggatcatctatcagacatgttgatccactacaat
cagactacggatatcatgtactatgaggtattggatatccctctaccagaactgcaaggc
ctgaaaacactgaaagttgcttttcatcatgctaccaaggaagaagttgtaatccatact
atcagattgcccaaacaaagcactgtcggcgacgttatcaatgatcttaagacgaaggtt
gagttatcccatcctaatgcagaacttaggttgcttgaagtcttctatcacaagatctac
aagattttcccacttaatgagaagattgagaatatcaatgatcaatactggacattgcgt
gcagaggagattcccgaggaagagaagaaccttggtcctcatgaccgtctcattcacata
tatcattttacgaaagatacagctcagaaccaagtgcaggtccagaattttggggaacct
tttttcctggtcattcgtgagggtgagacattgggtgaagttaaagtacggatacagaag
aagttgcaggttccagatgaagagttctcaaagtggaagtttgcatttttgtctttgggt
cgtcctgaataccttcaggagtcggacatcatttctagtcgttttcagagaagggatgtt
tatggtgcgtgggaacaatatctcggattggagcactcggataatactcctaaaaggtca
tatgcagccagtcagaatcggcacacgtatgagaagcccgtgagaatctataattag
DBGET
integrated database retrieval system
