Rhododendron vialii: 131301284
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Entry
131301284 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131301284
KO
K19022
AP-5 complex subunit beta-1
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131301284
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
131301284
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
131301284
NCBI-ProteinID:
XP_058183465
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Position
9a:complement(13880240..13887223)
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AA seq
1139 aa
AA seq
DB search
MEKPPPLKPLSPQEWETLIDDFQHGGARRNRWTSSHYGGLSLLSLSLSTLLRKDFPLNPK
LHLLVFLEHYFSDYAILDSDLAAAEHLLTRLVDTLRTLTLTPADASFPSPLKEQMMVLTS
SVFITLRIDGELVHYNYIRQLESLVELLLTVANRPNHGPDRQTRAVSCECLRELEKAYPC
LLSEIAGHLWGLCQSERTHASQSYVLLLTTVIHGIVLCKANVSILNTSIPLVPFNIPQFL
ITEKGGSGFNKEISGSSYKEQRRAMSFLLECPQLLNSCGLIEFLSLILPVAVALELQASL
LKVQFAGLLYTYDPLLSHWFLLIYKRFLDAFNGHEGEIARRLMLISKESQHYLVFRLLAL
HWLLGFIGWLSNEKKKAVLYAGLRFYPAVFDPLALKSLKLDVLAYGSIFLLGNDSRTGNE
EGIEKGQDDYDAGSGLSVVKLFEDGLVSVSAFKWLPPWSSETAVAFRTFHKFLIGASSHS
DTDPSSTVVLMESTIFHTLQTMLVELTLGFKGLVPVVVAFIDRLFGCHKHCWLGERLLQT
FDELLFPKVKIDYRLSYYFPIFDRIAQNETVPPGGLLEVLLQFMIFLVQNHGPDTGLKSW
SKGSKVLGICRTLLMHHHSSRLFIGLSHLLSFTCLYFPDLEVRDVARMYLRMLTCIPGKK
LRYILNSGDQLPGIAPSPQSSLYFNVQPPPSDNHKKSRAISSYIHLERVIPLLVKQSWSL
SLSTLGSGVANTAYLEGITDSEPSSVEPREVDGNTNNQIHSEVERVDRPHEPLRVMDSKI
SEIIRILRQHFSTIPDLRHMPGLKIRIPCNLRFKTEPFNRIWGVDLADKNFDGLDSLPAL
YATVLKFSSSAPYGLIPSNHIPFLLGEPPEIDYSVSNGVSLDIVPIEDGSRKEESYKAPV
TLELEPREPVPGLVDVSIEANTENGQIIRGQVQSITVGIEDMFLRALVPPDILEDAMPGY
YLDLFNALWEACGSSTYTGHEAFLLKGGKRAAAISGTRSVKLLEVPVTALIWAVEHYLAP
FVVGVLGGPLIDVVKNGGIIKDVIWKDVASESTFGDAISDTNFDRGPLRLKYLEDEGERE
NQVSKKNMGCFLILVFLPPRYHLLFQMEVCDVSTLVRIRTDHWPCLAYIDDYLEALFSD
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaccgccgcccttaaagcctctctctccccaagaatgggaaaccctaatcgac
gacttccagcacggcggcgcccgccgcaaccggtggacctcctcccactacggtggcctc
tctctcctctccctctctctttccaccctcctccgcaaggacttccccctcaaccccaag
ctccacctcctcgtcttcctcgaacactacttttccgactacgccatcctcgactcggac
ctcgctgcggccgagcacctcctcactcgcctcgtcgacaccctccgaaccctaacccta
acccccgccgacgcctccttcccgtcgcctctcaaggagcaaatgatggtactcacttct
tctgttttcattaccctgagaatagacggcgaattggtgcattataattatataaggcag
ctagagagcttggttgagttgttgttgaccgtcgcgaaccggcccaaccacgggccggac
aggcagacccgggccgtgtcgtgcgagtgcttgagggaattggagaaggcttacccttgt
ttgttgtccgaaatcgctggacatttgtgggggttgtgccagagtgaaaggactcatgct
tcccagagctatgtgttgttgttaactactgtgatccatggtattgttttgtgtaaggct
aatgtttcgattcttaatacttcaatcccgttggttccgtttaatataccgcagtttttg
atcacggaaaagggtggtagtgggtttaataaggagatttctgggtctagttataaggaa
caaaggagggctatgtcatttttgctagaatgccctcaacttttgaattcatgtgggttg
atagagttcttgtctttgattcttccggtggcggtggctcttgaattgcaggcgtccctt
ttgaaggtgcagtttgctgggttgctttatacctatgatcctttactgagccactggttt
ctattgatatataagcgttttttagatgcttttaatgggcatgagggagaaattgcccgc
cgccttatgttgatttcaaaagaatcccagcattatttggttttccgattgcttgctctt
cactggttattgggtttcattgggtggttatcaaatgagaaaaagaaagcagttctttat
gctggtttgaggttttatcctgctgtatttgatccccttgcactgaagtcgttgaagctc
gatgtgcttgcttatggttcaatatttttactcggtaacgactctagaactgggaatgaa
gaaggtatagagaagggtcaggatgactatgatgcaggttcaggattatctgtggtgaag
ctatttgaagatggtctggtttcggtatcagcattcaaatggttaccgccatggagctct
gaaaccgcggtggcattccgcaccttccacaaatttttgataggtgcgtcgtctcattct
gacactgacccttcttccacggtagttctaatggagtctaccatctttcacactttacag
acaatgttagtggagctgacattagggttcaagggattggttccagttgtcgttgctttc
attgaccgcttgtttggctgtcataagcattgctggttgggagagcgcctgcttcagacc
tttgacgagcttttgtttccaaaggtcaagatagattatcggttgtcatattacttccca
atatttgatagaattgcccagaatgagacggttcctcctggtggactgctagaggtgctc
ctccagttcatgatattccttgttcagaatcatgggccagacacaggattgaagtcttgg
tccaagggaagtaaagttcttggcatttgtcgaaccctgctgatgcaccaccatagctct
agattgttcattggactatctcatctcctttccttcacttgcctttattttcctgatctg
gaagttcgtgatgttgcgaggatgtacctgcgaatgttgacctgtattccaggaaagaag
ctcaggtacattttgaacagtggagaccaactccctgggatcgcaccatctccccagtcg
agcttgtacttcaatgtacaacctccaccctctgacaatcataaaaaatctagggcaatt
tcgtcctacatccaccttgagcgggtgataccactcctagtaaaacagtcttggtctttg
tctttatccactctagggagtggtgttgcaaacactgcttatctagagggcatcacagac
agtgaaccctcctcagtggagccaagggaggttgatggaaacactaataaccaaattcac
tcggaagtggaaagggttgaccgtccacatgagccgttacgtgttatggattcaaagata
tctgagataattagaatcttgaggcagcatttttccactatacctgatttaagacacatg
ccagggctcaagattaggataccttgtaatttgaggtttaaaacagaaccattcaatcgc
atatggggagttgatctggctgataagaattttgatggactagattcacttcctgcttta
tatgcaactgtgcttaagttttcttcttcagcaccatatggattaataccatccaatcac
atacctttccttcttggggagcctcctgaaatagactattccgtgagcaatggggtttca
ttagatattgttcctatagaagatggttccagaaaagaagaaagctacaaggctcctgtt
acgcttgaattggaaccacgggaacctgtgcctggtcttgttgatgtttccattgaagca
aatacggaaaatggccaaatcatccgtgggcaagtgcagagtatcactgttggaattgaa
gacatgtttctaagggctcttgttcccccagacattttagaagatgcaatgcctggttat
tatctagacttgtttaatgctctctgggaggcctgcggttcttctacctacactgggcat
gaggcctttctactgaaaggaggcaaaagggctgcagcaattagtgggacccgatcagtg
aagctgcttgaggttcctgtcaccgctttgatctgggcagttgagcactacttggcacct
tttgtggtcggcgttcttggtggacccctcattgatgtcgtgaaaaatgggggtatcatt
aaggatgtcatatggaaggacgtggcttcggagtctacgtttggtgatgctatttctgat
actaattttgatcggggcccacttcgtctgaagtacttagaagacgagggcgaaagagag
aatcaggtcagcaagaaaaacatgggttgctttcttattttggtattcctcccacctagg
taccatttacttttccaaatggaggtatgtgatgtttctactctagttcgcattagaacc
gatcactggccatgccttgcttacattgatgattatctggaagctttgttttctgattag
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