Rhododendron vialii: 131301420
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Entry
131301420 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Pathway
rvl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131301420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131301420
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131301420
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131301420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
DZR
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
131301420
NCBI-ProteinID:
XP_058183695
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Position
9a:complement(39670788..39675989)
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AA seq
321 aa
AA seq
DB search
MDGVSLCVNLLYDGQYQCNLGNEAKKVFMTIWIFSFRWCSLHNHSKETEMHWIGYAGGTL
GEGHQALAISIKCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKHY
SLGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECSITGDIPFLVSHLKDDHKVDMHTGCT
FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARN
YTYSLEVGANGRKLTWEGTPRSVRDGHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GRIWKEQQTPDGGVCIPNLSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtttcattgtgcgtgaacctgctatatgatggacagtatcagtgtaacctt
gggaatgaggcaaagaaggtttttatgactatctggatcttctcttttcgttggtgtagc
ctccacaaccactctaaagagacagagatgcactggatcggttatgctggaggaacctta
ggtgaaggccatcaggccctggcaatttctataaagtgtcacaatgggcatactctgtgt
tccacctgtaaaacaagggtgcataaccgctgcccgacttgtaggcaagagcttggtgac
attaggtgcctagcactggagaaggtagctgaatcccttgaactcccttgcaagcattat
tctttggggtgcccggagatattcccgtattacagcaaactcaagcatgaggcagtttgc
aacttcagaccatacaactgcccatatgctggttcagagtgctctattacgggggatatt
ccttttctggtttcccatctgaaagatgaccacaaggtagatatgcacacaggatgcaca
ttcaatcatcggtatgtgaagtccaatccccgtgaagtagaaaatgctacttggatgcta
acagttttccactgttttggccaatacttctgccttcactttgaagcattccagctgggc
atggctcctgtctacatggcgttcctccgttttatgggtgatgaaaatgacgcccgcaat
tacacctacagtctagaagttggggcaaatgggaggaagctcacatgggaaggcacccca
cggagcgtcagagatggccaccggaaagttagagatagccacgatggtctcattatacag
cgaaacatggcgcttttcttctctggtggggacaggaaggagctgaagctgagagttact
gggaggatatggaaagaacaacagaccccagatggtggagtgtgcataccaaacctcagc
agctga
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