Rhododendron vialii: 131301718
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Entry
131301718 CDS
T09330
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131301718
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131301718
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
Helicases
131301718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
DEAD
HA2_N
HA2_C
AAA_22
ATPase
nSTAND3
ResIII
Motif
Other DBs
NCBI-GeneID:
131301718
NCBI-ProteinID:
XP_058184090
LinkDB
All DBs
Position
9a:complement(28422210..28434880)
Genome browser
AA seq
1390 aa
AA seq
DB search
MDERLRRGDDSSSNCCLKASPLLDSPYPEQMEPFVHVIGQSGDLERGEDLGSGKGGGDSN
AIILRGKRRNKTKGNSQVHEQLRTKKNLTLTKCQKRKLNKIAEEKEKALLLSKSIETLEK
YKIQDDAYSLMWSSRNLSQVETVRERRRRAVQLSKVGLAMPHSDQPLKRKAAVSFSCEIE
PDSQSTKGIDENNFWQPMTVISEIPTPLGSSKESFSSFGLGAVDGYGATIPAKEVANRTN
DSCVRDDAQDSFPTTFNSERREISKPMDRGVESPKMHINNATNLADCPPQRGLTAPVVVH
VSRKKEVENKRKDLPIVMWEQEIMEAINENSTVIICGKTGCGKTTQVPQFLYEAGFGSDQ
SRSGIIGVTQPRRIAAYNTAERVADELGLCQGKEVGYQVRHDRRIGDSCSIKFMTDGILL
RELQSDVLLKKSSIIILDEAHERSLNTDILIGMLSRVIKLRQDVYEEQQRKVFSGQIISP
ENRVSPLKLVLMSATLRVEDFVSGRGIFDNPPPVIEIPTRQYPVTIIFSKRTEIVDYVGQ
AYKKVLSAFLTLSIHKGLPPGGILVFVTGQKEVEDLCRMLRKASKEIVENSSEINMEKEV
SAVSAENDIGENDMSEVSEAFEMHGNSCYNQTDRFSSYDDNHDDLDDIESDFSDDLRPES
DLEGADDVELLNQRAVSDLEEADDVELLNQKMENRNDLSEFFGEEGSLALLKASFEVLAR
KTTLSPESDNKQVVPSTPEGCSNQPIPIVGEKRGGAGLCTGAMCVLPLYAKLSESSQHLV
FKEIKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYNSSNGMETYEVQWISKASA
AQRTGRAGRTGPGRCYRLYSSAVFNNIFPDFSIAEILRVSLDGVVLLVKSMGVPEVSKFP
FPTPPEATALSEAERCLTTLEAFDSKGRLTSLGKAMAEYPISPRHSRMLLTVIQIMRKVK
RSDRANLVLGYAVAAAASLSLSNPFAMQFEGGDTDTDGLKQDVESGSGDSKKTRDKEEKL
KKKELKESAKVSCAKFSNPSSDVLTIAYALQCFELSLSRVEFCKEHALHLKTMKEMANLR
EQLLRQVFKRSFCGLQQEFSWTHGTIKDVKLAWRVSSDKHPLRPEEEELLGKAICASWAD
RVAKRIGRVSASEEDRKVHATRYQACMVRETVFLHRRSSLSKSAPEFLVYSELLYTKRPF
ILGATSVKADWLVKYAKSLCCFSAPLADRKPYYDPELDQVFRWVVPTFGPHRWQLPLHGE
PIENDSHRVAVFAAALLEGHVLPCLISVGKFLAASPASILRPEALGQRRVGNLLIKLQTR
LRIIDSCAMLREAWDENPWELHSEILDWFQLGFRDQFEDLWAKMHHEVLLDSKERFPKRI
KRARKENKLS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcttaaggcgaggggacgacagtagttcaaactgttgcttaaaagcttca
ccattgttggattctccttatccggaacaaatggagccatttgtccacgttattggacaa
tctggggacttggagcgtggtgaagatttaggaagtgggaaaggtgggggtgatagcaat
gcaatcatcttgcgaggaaagagaagaaataaaacgaaaggcaacagtcaggtgcatgaa
caacttaggaccaagaaaaacctgacgttgacaaaatgtcagaaaagaaagctgaataag
atagcggaggagaaggagaaagcacttctcttatcgaaaagcatcgagaccttggagaaa
tataaaattcaggatgatgcatactcactgatgtggtcttcacgaaaccttagtcaggtt
gaaactgtgcgtgaaagacgtagaagggcagtgcaactctctaaagtgggtttagcaatg
cctcatagtgatcaacctttaaagagaaaggctgctgtcagtttttcctgtgaaattgaa
cctgattctcagtctacaaaaggcatcgacgagaataacttttggcagcccatgacagtc
atatctgaaattcctactcctttgggatcttccaaagaatcattttctagctttggactt
ggtgcagttgatggatatggagctaccattccagctaaggaagttgccaacagaactaat
gacagttgcgttcgagacgatgctcaggattctttccccaccacattcaacagtgagagg
agggagattagcaaaccaatggatcggggagttgaaagtccgaaaatgcatatcaacaat
gcaaccaacctggcagattgtcctccacagagaggtctaactgctccagttgtagtgcat
gtatcaagaaaaaaagaggttgagaacaagaggaaggatcttccaatcgtcatgtgggag
caggagatcatggaagctataaatgaaaatagtacggttattatttgtgggaagacaggt
tgtggtaagaccactcaagttccgcagttcctttatgaagctggctttggttcagaccag
tctaggagtggtattattggtgttacccaaccacgccgtattgctgcctataacactgcc
gagcgggtggcagatgagcttggtctttgtcaaggcaaggaggttggctatcaagttagg
catgaccgcaggattggagacagttgctccatcaagtttatgactgatggaattttgcta
cgagaactacagagtgatgtcttattgaagaagtcctcgatcataattttagatgaggct
catgagagaagcttgaacactgacatacttattggaatgctttcccgtgttataaaactt
cgccaggatgtatatgaagagcagcagcgtaaggtcttttcaggacaaataattagccct
gaaaatagggtctctccactgaaactggtgctgatgagtgccaccttgcgagttgaagac
tttgtttctggaagaggtatatttgataatcccccacctgtaattgaaattcctacccgg
caatatccagtaactatcatcttctcaaagcggacagagattgtggattatgttggccaa
gcctataagaaggtcttgtctgcattcctaacattgtcaattcacaagggactgccacct
ggtggcatacttgtctttgtaactggtcagaaagaagtagaggacttgtgccggatgctg
aggaaagcttcaaaggaaatagttgagaatagctctgaaataaatatggagaaagaggtt
tctgcagtctcggcagagaatgacatcggggaaaatgatatgagtgaagttagtgaagca
tttgagatgcacggaaattcatgctacaaccaaactgataggtttagttcttatgatgac
aatcatgatgatttagatgatattgagtcagatttttctgatgatctgaggccagagagt
gatttggaaggagctgatgatgtcgagttattgaaccaaagggcagtaagtgatttggaa
gaagctgatgatgtcgagttattgaaccagaaaatggagaatagaaatgatctctcagaa
ttctttggtgaggaagggagccttgctttattgaaggcttcattcgaggtcttggccaga
aaaactaccttgtctcctgaatctgacaacaagcaggttgttccttcgactccagaagga
tgctcaaaccagcccattccaattgtgggggagaaaaggggtggagctggtctctgtact
ggtgcaatgtgtgttcttcccctttatgccaagctttctgaatcatctcagcatcttgtg
tttaaagagatcaaggaaggagaacgcctagttgttgttgccactaatgtggctgaaacc
tctttaaccataccaggtataaaatatgtggtcgacactggaagagaaaaggttaagaaa
tataactcctctaatggcatggaaacatatgaagtacaatggataagcaaggcatctgct
gctcaacgcacaggaagagctggaagaacaggacctggccgctgttatcgcctctactct
tccgcagtttttaacaacatttttcctgacttctcaattgccgagatattaagagtatct
cttgatggcgttgtcctccttgtgaaatccatgggtgttcccgaggtttcaaagttccca
tttcctactcctcctgaggctactgccttgtctgaagcagagcgttgcttaacaactctt
gaagcatttgatagcaaggggagactgacatcgctagggaaggctatggcagagtatccc
atcagtcctcgtcactcacggatgctccttacagttatccaaatcatgcgcaaggtgaaa
agaagtgatcgggcgaatcttgttctaggatacgcagtggcagcagcggcatctttgagc
ttgtcaaaccctttcgcaatgcagtttgagggaggcgacacagataccgatggcttgaag
caggatgtggagtctggctccggagatagcaagaaaactagagacaaggaagaaaagttg
aaaaaaaaggagctaaaagaatctgctaaagtgtcttgtgcaaaattttctaatcccagc
agtgatgttttgaccatagcttatgctttgcagtgctttgaactttctctaagccgagtg
gaattctgcaaggaacacgctttacacctgaaaacaatgaaggaaatggccaatctgaga
gagcagctacttcgccaagtgtttaaacgaagcttttgtggtctgcaacaggaattttca
tggactcatggtactatcaaagacgtaaaacttgcttggagggtttcctccgacaagcat
cctcttcgaccagaggaggaggagctcttgggcaaagctatatgtgccagttgggctgat
agggttgccaaacgcattggaagagtttcagcatcagaggaagacagaaaagttcatgca
actcgctatcaggcttgcatggttagagaaacagttttcctccataggcggtcatctctc
tctaagtctgccccagaattcttggtgtacagtgaactgctatatacaaaacgaccattc
atactcggagcaacaagcgtgaaagccgattggcttgtcaagtatgctaagtccttgtgc
tgtttctctgccccactcgcagatcgcaaaccttattatgatcccgagttggaccaagtt
ttccgttgggtcgttccgacttttggccctcatcggtggcagctcccattgcatggtgaa
cctatcgaaaatgattctcacagagtagctgtatttgctgctgctttgcttgaaggccat
gtgttgccatgcttaatatctgtggggaagttcctggcagcctcacctgccagcattttg
aggccagaggcattaggtcaaagaagggttgggaatcttctaattaagttacagaccagg
ttgagaattattgacagctgtgccatgttaagagaggcttgggatgagaatccttgggaa
ttgcattcggaaattctagactggtttcagttgggttttcgtgatcaatttgaagatctt
tgggccaaaatgcatcatgaggttcttttagactctaaagaacgtttccccaaaaggatc
aagagagcaagaaaggagaataaactaagctag
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integrated database retrieval system
