Rhododendron vialii: 131301762
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Entry
131301762 CDS
T09330
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
rvl
Rhododendron vialii
Pathway
rvl04142
Lysosome
rvl04144
Endocytosis
rvl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131301762
04142 Lysosome
131301762
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131301762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131301762
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131301762
Membrane trafficking [BR:
rvl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
131301762
Exosome [BR:
rvl04147
]
Exosomal proteins
Proteins found in most exosomes
131301762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
131301762
NCBI-ProteinID:
XP_058184154
LinkDB
All DBs
Position
9a:37105144..37119392
Genome browser
AA seq
1703 aa
AA seq
DB search
MAAANAPISMKETLTLPTLGITPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIELKAKMKSYQMPEQVVFWKWI
TPKMLGLVTQTSVYHWSIEGESEPVKMFDRTANLANNQIINYRCDPTEKWLVLIGIAPGS
AERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVPGNENPSILISFATKSVNAGQITS
KLHVIELGAQPGRPSFTKKQADLFFPPDFADDFPVSMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDATQFLDVIRAAQDADVYHDLVKYLLMVREKTKEPRVDSELIYAYAKIDRLGEI
EEFILMPNVANLPNVGDRLYDEGLYEAAKIIFAFISNWAKLASTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLEEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSNNVTAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEGLLVYFIEQGKKECFASCLFVCYDLLRADVVLELAWMNNMIDFAFPYLLQFLREY
TGKVDELIKDKLEALIEVKAKEKEEKDIMAQQNMYAQLLPLALPAPPMPGMGGGGMGYGP
PPPMGGMGMPPMPPFGMPSMGSY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctaacgctccgatcagcatgaaggaaaccctaacgttgcctaccctaggg
atcactcctcaatttataactttcacgcatgttaccatggaatccgacaagtatatatgc
gttcgtgagacgtcgcctcagaacagtgttgtaattattgatatgagtatgccaaatcag
cccttgaggagacctataacggcggattcggccctcatgaatcccaattccagaattttg
gctcttaaagcccaacttccgggaactactcaggatcacttgcagatatttaacattgag
ttgaaagcaaaaatgaaatcatatcagatgcctgagcaggttgttttttggaaatggatc
actccaaagatgttgggtcttgtcacacaaacctctgtatatcattggtccatcgaaggt
gaatctgaacctgtgaagatgtttgacagaacggctaatctagccaataatcagataatt
aactaccgatgtgatcctaccgaaaaatggttggtattgattggaatcgctcctggttcg
gccgagagaccgcaacttgtcaaaggaaatatgcaactcttttctgtggatcagcagcgt
agtcaagctcttgaagctcatgcagcttcatttgccacattcaaggttccgggaaatgag
aatccttccattcttatttcttttgctacaaaatcggtaaatgctgggcagattacatca
aagttgcatgttattgagctcggtgcccagccagggagaccatcttttacgaagaagcag
gcagatcttttctttcctccagattttgctgacgactttcccgtttccatgcagatttcc
cacaagtacagtttgatttatgtcatcaccaagctagggcttctgtttgtctatgacctg
gaaacagctactgctgtatacaggaataggataagtccagatccaatttttctgaccgca
gaagcttcatcagttggaggcttctatgccatcaataggcgtggccaagttttgcttgcc
acagtgaatgaagcaacaattgtgcctttcgttagtggccaattgaacaatttggagctt
gctgtcaatcttgcaaagagagggaacctacctggtgccgagaatttggttgtccagcgt
ttccaagaattatttgctcaaaccaagtataaggaagctgctgagcttgctgcagaatct
ccacaagggatcctccgcactcctgatactgtggccaaatttcagagtgttcctgtacaa
gctgggcaaacaccacctttattgcagtactttggaactcttttgactaaagggaagctt
aatgcatttgagtccttggaattgtcacggcttgtggtgaatcagaacaagaaaaatctt
ttagagaactggttggctgaagacaagttggaatgcagtgaagaacttggagaccttgtc
aagactgtggacaatgaccttgcactgaaaatatacatcaaagccagggctactccaaaa
gttgttgcggcttttgcagagcgtagggagtttgacaaaattctgatatactccaagcag
gttggatacacgcctgattatctgtttcttctgcaaacaatactccgatcagatcctcag
ggagctgtcaattttgccttaatgatgtctcaaatggagggaggttgtccaattgattac
aacactataactgatctctttcttcagaggaacttgatccgtgaagcaacagcatttttg
ttagatgttctgaagcccaatttgccagagcatggtttcctgcaaacaaaggtcctggaa
attaatcttgttacgtttcctaatgtggcggatgctattttagcaaatggtatgtttagt
cactatgaccgtcctcgtattgctcaactctgtgaaaaagctggtctctatgtgcgggcg
cttcagcactactcagaattgccggatataaaacgtgtcattgtgaatacgcatgcaatt
gagccacagtctcttgtagagttcttcgggactctttctaaggagtgggcactggagtgc
atgaaggaccttctgttggtcaacctaagaggcaacctccagataattgtgcaggttgcc
aaggaatactctgagcagctgggagttgatgcatgcatcaaactctttgagcagttcaag
tcatatgaagggctgtactttttccttgggtcatatttgagctccagtgaggatcctgag
attcactttaagtacattgaggctgctgccaagactggacaaattaaggaggtcgaacgt
gtgaccagagaatcgaacttctatgatgctgaaaagacaaagaacttcttgatggaagca
aagcttcctgatgcacgaccacttatcaatgtatgcgatcgttttgggtttgttccagat
ttgacccactacctttattcgaacaacatgctccgctacatagaaggttacgttcagaag
gttaacccaggaaatgctccattagtggtagggcaactgctggatgatgagtgccctgaa
gattttattaaaggccttattctctctgtccgttctcttcttccagttgaaccactggtg
gaggagtgtgagaaaaggaatcgactgcgattacttacccagttcttagagcatcttgtg
agtgagggaagccaagatgtacatgtccacaatgctctggggaaaatcataatagacagc
aataataatccagaacactttctcaccacaaacccgtactatgattcgcgtgttgttggc
aaatattgtgagaagcgtgatcccaccctcgctgttgttgcttaccgcagaggacaatgt
gacgatgagcttatcaatgtaacaaataagaactccctatttaaactgcaggccaggtat
gtggtcgaaaggatggatggagatctgtgggagaaggttcttaaccccgagaatgaattt
agaagacagcttattgatcaagttgtatctactgctttgcctgaaagcaagagcccagaa
caagtttctgcagctgttaaagctttcatgactgccgatcttcctcatgaattaattgag
cttcttgaaaagattgtgcttcaaaattctgcgtttagtggaaactttaatctgcagaac
ttacttatcttgacggccattaaggcagatccatctagggttatggattacatcaataga
ctagacaactttgatggacctgcggttggagaagtggcagtggaagcccaactgtatgag
gaagcgtttgcaattttcaagaagtttaacttgaatgtccaggcagttaatgtgttactg
gataatatcagaagcattgaccgggctgttgaatttgcgtttcgtgttgaagaagatgct
gtttggagtcaggtggccaaggctcaactcagggagggtttagtgagtgaggcaattgag
tcatttattcgtgcagacgacgccacccaattcttggatgttattcgtgctgctcaggat
gcagatgtttatcatgacttggtgaagtaccttctgatggttagagaaaagacaaaggaa
ccaagggttgacagtgagctcatttatgcatacgcaaagattgataggctgggtgagatc
gaggagttcattctgatgcctaatgttgctaatcttccaaatgttggtgaccgcttgtat
gatgaaggcctgtatgaggctgcaaagattatatttgcctttatttctaactgggccaag
ttggctagcacactcgtcaagctcaagcagttccaaggtgctgttgatgcagcaagaaaa
gcaaacagctcaaagacatggaaggaagtctgctttgcttgtgttgatgcagaagagttc
cgcttagctcaaatatgtggcctcaacattatcatacaggtggatgacttggaggaggtc
agtgaatattatcagaacagaggatgcttcaacgagcttatatctctcatggagagtggt
ttgggattggaacgtgctcatatgggtatctttactgagttgggtgtcctatatgctaga
taccgctatgagaagcttatggagcatatcaaattgttttcaactcgtctaaacattcct
aagctgattcgagcttgtgatgaacaacaacactggaaggaactcacatatttatatatt
cagtacgatgagttcgacaatgctgccacgaccatcatgaatcattctccagaagcatgg
gaccacatgcagtttaaagatgttgcagtcaaagttgctaatgttgaactgtattacaaa
gctgtacacttctacttggaagagcatcctgatctaataaacgatatgcttaacgtgctt
gcacttcgcgttgatcatacacgtgtggttgacataatgcgaaaggctggtcacttgctt
cttgtgaagccatacatggtcgctgttcagagcaacaatgtgactgctgtgaatgaagct
cttaatgagatttatgtggaggaagaagactatgacagattgcgagaatcgattgacttg
catgatagctttgatcagattggactggcacagaagattgagaagcacgagcttctggag
atgaggcgtgttgctgcttatatttacaagaaagctggtagatggaagcagtctattgca
ttatcaaagaaagataatctctacaaagatgccatggagactgcctcacaatctggggat
cgcgaacttgctgaggggttgcttgtttacttcattgaacagggaaagaaagaatgcttt
gcatcatgcctctttgtttgttatgatttacttcgcgccgatgtggttcttgaacttgcc
tggatgaacaatatgatcgacttcgccttcccatatctgttacagtttctccgtgagtac
acgggcaaggttgatgaattaattaaggacaaactagaggctcttattgaagttaaggct
aaagagaaggaagagaaggacataatggcacaacagaatatgtatgcacagttgcttcct
cttgctttgcctgcacccccaatgcctggaatgggtggcggaggtatgggctatggaccc
ccaccccccatgggcggaatggggatgcctccaatgccaccattcggtatgccatcaatg
ggctcctactga
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integrated database retrieval system