Rhododendron vialii: 131301975
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Entry
131301975 CDS
T09330
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131301975
03036 Chromosome and associated proteins [BR:
rvl03036
]
131301975
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131301975
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131301975
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131301975
microRNA pathway
RISC loading complex
131301975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
131301975
NCBI-ProteinID:
XP_058184532
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Position
1a:complement(37777538..37793585)
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AA seq
915 aa
AA seq
DB search
MDSHEGNGVGNGAGNGAGNGASESLPPPPPVPPNVEPEQVLEPAKKKVVRVPIARRGLGS
KGNKIPILTNHFKVNVTNVNGDFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYDTELA
GKDFAYDGEKSLFTLGPLPRNKLEFTIVLEDVVSSRNNGNKSPGSPNDDRKRQRRPYNSK
TFKVEISFAAKIPMQSIANALRGQESENSQEALRVLDIILRQHASKQGCLLVRQSFFHND
PKNFVDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFQ
IDWAKAKRTLKNLRIKTNPANTEFKICGLSEKPCKEQMFSLKKGKDEDGEIQTVEVTVYD
YFVNHRNIELRYSGDLPCINVGKPKRPTYFPLELCSLVSLQRYTKSLSTFQRSSLVEKSR
QKPQERMRVLTDALKVNNYDAEPMLRSCGISINNNFTQVEGRVLPAPKLKGGNGEDFFPR
NGRWNFNNKKFVEPATVERWAVVNFSARCDVRGLIRDLTRIGESKGIKIEAPFDVFEESP
QNRRAPPPVRVDKMFEDVQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADFGIVTQCM
APTRVNDQYLTNLILKINAKLGGLNSLLSVEGSPSMPLISKVPTMIIGMDVSHGSPGQSD
VPSIAAVVSSRNWPFISRYRASVRTQSPKVEMIDSLYKRVSDTEDDGILREALLEFYVSS
GKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKCLDEKWSPKFVVIVAQKNHHTKFF
QPGSPDNVPPGTVIDNKVCHPRGNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADELQEL
VHSLSYVYQRSTTAISVVAPICYAHLAATQVGTFMKFEEFSETSSSHGGLTSAGPAPVPQ
LPKLQAAVCNSMFFC
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggattcccacgagggaaacggtgtaggaaatggtgcaggaaatggtgcaggaaatggt
gcatcagagtctttgccaccgccccctccagttccaccaaatgttgagccggagcaggtt
cttgaaccagctaagaaaaaggtggtgcgcgtcccgatagcgagacgtggtttgggatcg
aaggggaataaaattcctatactgacaaatcactttaaagtgaatgtcacaaatgttaat
ggtgacttcttccattacagtgttgctcttttttatgaagatgggcgtccagtagacgga
aagggcattggtaggaaggtccttgacagagttcatgacacttacgatacagagctcgct
gggaaagacttcgcgtacgatggggagaaaagtctgtttacactgggtcctcttcctaga
aacaagctcgaatttacaattgtgcttgaggatgttgtgtccagcaggaacaatggtaat
aagagccctggaagccccaacgatgaccggaaaaggcaacgaagaccgtacaattccaag
acgttcaaggtggagatcagctttgcagcgaaaatcccgatgcagtcaattgcaaatgct
cttcggggtcaagaatcagagaactctcaagaagccctgagagttctggacataattttg
agacaacatgcatcgaagcagggctgcctccttgttcgccagtcgttttttcacaatgac
ccgaagaatttcgtagatgttggaggtggcgttctgggctgcaggggcttccactctagt
ttccggactacacagggtggattgtctctaaacatagatgtttctacgaccatgataatt
cagcccgggccggttgtcgatttccttattgcaaaccagaatgtgaaagacccctttcaa
attgattgggcaaaggcgaaacggaccctgaagaatttgaggataaagaccaatcctgcg
aatactgagttcaaaatatgtggactgagcgaaaagccttgcaaagagcagatgttttca
ttaaagaagggaaaggatgaggatggagaaatccagactgttgaagtgactgtgtatgat
tattttgttaaccaccgcaatatagagttgcgttattctggtgatctaccgtgcattaat
gttgggaagccaaagcgccctacttacttccctctggagctatgttctttggtatccttg
caacgctatacgaaatcactctcaacttttcaaaggtcgtctctagtcgagaagtcaaga
cagaagccacaagaaaggatgagggttttgactgatgctcttaaagtcaacaattacgat
gcagagcctatgctgcgttcttgtggcatttcaatcaataacaacttcacccaagttgaa
ggccgtgtgctcccagccccaaagttgaaagggggaaatggagaagacttctttccgagg
aacggcaggtggaattttaacaataagaaatttgtggaaccagcaacggtagagcgctgg
gctgttgtaaacttttcagctcgctgtgacgtacgtggccttattagagacttgacaaga
attggagaatcgaagggcattaaaattgaagctccgtttgatgtatttgaggagagtcca
caaaatcggcgggccccacctcctgttcgagtggacaagatgtttgaagacgtacaatcc
aaacttcctggagcacctaaatttctcctctgtctgcttcctgagaggaagaactgtgac
atatatggtccatggaagagaaagaacctggctgattttggaattgtgacccaatgcatg
gctccaacaagagtcaatgatcaatatctcacaaatctcatcctcaagatcaatgcaaag
cttggtggactcaattcgttgttatctgttgaaggttctccctctatgcccttgatatct
aaggttcctaccatgattattgggatggatgtatcacatggctctccgggccagtctgat
gtaccatcgattgcagcggtcgtcagctccaggaactggccattcatttcacgttatcgg
gcttctgtccgcacccagtcacccaaagttgagatgatagattcgctttataagcgtgtt
tctgacactgaagatgatggcattcttagggaggctttactggagttttacgtgagttca
ggcaagaggaagcccgatcaaattattatattcagggatggagtcagcgagtcgcagttc
aatcaagttctgaacattgaactggatcaaattattgaggcctgcaagtgtctggatgag
aaatggtcaccgaagtttgtggtgattgttgcgcaaaagaatcatcatacaaagtttttc
caacctggatcgcccgataatgtcccacctggtacggtaattgacaacaaagtatgtcat
ccccggggcaatgatttttacctatgtgcacatgctggaatgattgggaccactaggcca
acacactaccatgtcctgttggatgaggttggtttctcggctgatgaactccaggagcta
gtacattctctatcctatgtataccagaggagcactacggccatttcagttgttgctccg
atatgttacgctcacttggcggccactcaggtgggaacttttatgaagttcgaagaattc
tcagagacatcctcaagccatggggggttgacttctgcagggcctgcacctgtgcctcag
ttgcctaaacttcaagctgctgtgtgcaattcaatgttcttttgttga
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