Rhododendron vialii: 131302251
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Entry
131302251 CDS
T09330
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131302251
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
131302251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
Cnd1
zf-RING_16
INTS1_R4
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
131302251
NCBI-ProteinID:
XP_058184764
LinkDB
All DBs
Position
10a:complement(5080742..5103798)
Genome browser
AA seq
1783 aa
AA seq
DB search
MSNSGGPRGISLPNTVHSEVAPCLPLPSLPVFCGAFDQELRLFDGAAGSGSRSLNRSDVV
NQCGKVADLLRATDVAYLNLRAEATLLSYGILEPPDLYNEVLRCDSEAFECSTSGPFKEQ
VSSSSVSEKKPFEQSTPIAIQLQRDFAGNHNHQPDYILANETFTSSRKPKVKKKRSEDYP
SSVAPDPIELQDTAIRGFCEFLEEFCGRAEIPSDDRDDAEWLQLPVADVRQLVNEILSSR
TKKVLHLIPVDVLVRLLRVLDHQIHRSEGLSVNECEHADSDVVSSICGALESIHAALAIM
AYNDMPKQLYNEELIERILEFSKHQIADIMSACDPAYRALHKPVETGVFEDEEDDEGADY
GSASKRKRTVRSAKVKKSSVNRVSAAVNTILQKLCTILGFFKDLLTIEHLSDSCILQLLR
TSFTTLLVDNIQLLQLKAISLIGGIFYSYAQHRTYVIDEVLQLLLKLPFSKRIPRTYHLP
DEEQRQIQMITALLIQLVHSSANLPEALRQANGKNLIFEASIDSSSPTKCHEAVTESCCL
FWSKVLQRFASTKSQDASEVKTMMESLVVDLLTTLNLPEFPASAPILEVLCVLLLQNAGL
KSKDIAARSMAIDLLGTIAARLKHDAVLYRTEKFWIVEELSNIENPERSYANDACALCRN
EKIEKPLFLCQGCQRLFHADCMGVREREVPTRGWYCQFCQCQKQLTVLQSYCKAHCKDDG
LNNGSLSEKSSENANSVAKVEVVQQMLLNYLQDCGSAEDVHLFTRWFYLCIWYKDVEISS
QMFSYHLARLKSKAIVRNSGIVSSLLSRESVKKIALALGQNNSFSRGFDKILHMLLASLR
ENSPVIRAKALRAVSIIVEADPEVLCDKFVQMAVEGRFCDSAISVREAALELVGRHIASH
PDVGLQYFEKVAERMKDTGVSVRKRAIKIIREMCTSNTDFAAFTRACIEIISRISDEESS
IQDLVCKTFYEFWFEEPSGSQARLYGGSSSVPLEVAKKTEQMVEMLRKMPNHQVLVTVIK
RNLALDFFPQSTKAVGINPVSLASVRRRCELMCKFLLERILQVEEMNNDEVEARTLPYVL
LLHAFCVVDPTLCAPATDPSQFVVTLQPYLKTQADNRAVAQLLESIIFVIDSVLPLLRKL
PQNVVEELEQDLKQMIVRHSFLTVVHACIKCLCSLSRVAGKGSAVVEYLIQVFFKHLDAL
GFDNKQQVGRSLFCLGLLIRYGNSLLSTSCSIDQNIDVKNSLKLFKKYLHAEDFIIKARS
LQALGYVLIARPEYMLEKDVGKILEATLSSGTDVRLKMQALQNIYEYLLDAESQMGTEKT
SNVAGHPMDAGHSVPVAAGEGDTNICGGIIQLYWDNILGRCLDENEQVRQSAVKIVEIVL
RQGLVHPITCVPFLIALETDPQEGNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFIFIR
SMSGSSENPNPRVQLKVPESMKGTFESGSFTYARLGVSRIYKLIRGNRISRNKFMSSVVR
KFDTPIWNNSVIPFLMYCTEILALLPFTLPDEPLYLIYAINRVIQVRAGTLEANMKAFLH
LWQEDAKKLNGNGTTQPQGPSCQPVCDQTIPMDLNGTLEVEFGDQPVSNHSEPMYQNLRP
RNSYNNYHISEDDMQKIQADCLSATALQLLLKLKRHLKILYSLNDARCQEFSPTEPIKPG
EVLSRQNISFNITETRTELPTTHEEVLQRYQEFKTALKEDTVDYSTYTANIKRKRPPPSR
RGGRSGRMAGRDDEDYDDDEDWGSGVRRPNNSGRKSSRGRQWS
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattccggtggtccacgtggcatcagcctcccgaacacagtccactccgaagtc
gcgccgtgcttgccgctgccgtcgctgccggtgttctgcggcgcgttcgatcaggagctg
cggttgttcgacggagccgcggggagtggttcgaggtcgttgaatcggagtgacgtggtg
aatcagtgcgggaaggttgctgatctgctcagagcaactgatgtcgcgtacttgaatctt
agagccgaagcaactctgctttcttatggcattttagagcccccagatctgtacaatgaa
gtacttcgatgtgattctgaagcatttgaatgcagtacatcaggtcctttcaaggagcaa
gtttctagtagttcagtgtctgaaaaaaagccttttgaacagagtacacccattgctatc
caactgcaaagggactttgcaggaaatcacaatcatcagccggactacattcttgctaat
gagacatttacatcttctagaaaaccaaaagttaagaaaaaaagaagcgaagattatcca
tcatcagttgctcctgatcccattgaacttcaagacactgctattcgaggcttctgtgag
ttcttggaggagttctgtggcagagcagaaattccaagtgatgatcgggatgatgcagaa
tggttgcagttgcctgttgctgatgttagacagcttgtgaatgaaattttatcgagccgg
acgaagaaagtcctacatttgattcctgtagatgtccttgtaagacttttgagggtttta
gatcatcagattcatcggtcagaaggtttgtcagttaatgaatgtgaacatgctgattca
gatgtagtgtcatctatttgtggtgctctggagtctattcatgctgctctcgccataatg
gcttataatgacatgccaaagcagctatacaatgaagagctcattgaaaggattctggag
ttctctaagcatcaaattgctgacattatgtcagcttgtgatcctgcatatcgtgctttg
cacaaacctgttgaaactggggtttttgaagatgaagaagatgacgagggtgctgattat
ggttctgcaagcaagagaaaacgtactgttaggagtgcaaaagtgaagaaatcatcagtg
aacagggtctctgctgctgtgaacactatacttcagaaactatgcaccattcttggtttt
ttcaaggatttgttgacaatagagcacttatcagatagttgtattctacaattattgagg
acaagcttcacaacactcttggtggataatatccaactcttgcaactgaaagccattagt
ttaatcggcgggattttttactcatacgcgcaacatcgaacttacgtgatagatgaagta
cttcaactgctcttgaagttaccattctccaaaagaataccaagaacttatcatctacct
gatgaggaacagaggcagatccagatgataacggctttgctgattcagttggttcactct
agtgcaaatcttcctgaggccttaaggcaagcaaatggaaaaaaccttatttttgaggcc
tcaattgattccagttcccctactaaatgccatgaggctgttaccgaatcatgttgcctt
ttttggagtaaagtccttcaacgatttgctagtactaaaagtcaagatgcatctgaagtg
aaaacgatgatggagagccttgttgtggatttacttacgacattgaatctgcctgaattt
cctgcttctgctcccattctggaggttctgtgtgtattactacttcagaatgctgggctg
aaatccaaagatatcgctgcacgttccatggccattgatctccttgggactattgctgca
aggttgaaacatgatgctgtcctttacaggacagaaaaattttggatagtggaggagttg
agtaatatcgaaaatcctgaacgcagttatgccaatgatgcatgtgccttgtgtaggaat
gaaaagattgaaaaaccattgtttctatgtcaaggttgtcagagattgtttcatgcagac
tgcatgggagttagagaacgtgaagttcccacccgtggctggtactgtcagttctgtcaa
tgtcagaaacaacttactgttttgcaatcctattgcaaagcacattgcaaggatgatggc
ttaaacaatggtagtctgtcagaaaaatcttccgaaaatgccaattcagttgcaaaagtg
gaggttgttcagcagatgcttctgaattacctgcaggattgtggttctgctgaggatgtg
catctctttacccgctggttttatctttgcatatggtacaaggatgttgagatctcttca
cagatgttctcttaccacctggcgagactgaagtcaaaagctattgtgcgtaactctggg
attgtttcgtcattattgtcaagggagtcagtcaagaagatagctttggcattgggacaa
aataattctttctccagaggatttgacaagattcttcacatgcttctggcaagtttaagg
gagaattctccagtgattcgtgcaaaggcattacgagcagttagtatcattgtagaagct
gatccagaggttttatgtgacaaatttgtccaaatggctgttgaaggaaggttttgtgac
tctgctatatctgttagagaagctgcactggaacttgttggtcggcatattgcgtctcat
cctgatgttgggttgcagtattttgagaaagttgctgagaggatgaaggatactggtgta
agtgtcagaaaacgggctatcaaaatcataagagagatgtgcacatcaaatactgatttt
gcagcatttacaagggcttgcattgagattatttctcgtattagtgatgaagaatccagt
attcaggatcttgtctgcaagacattttatgaattctggtttgaggaaccttcgggttca
caggctcgtctctatggaggtagtagttctgttccactggaagtcgctaagaaaactgag
cagatggttgagatgttaaggaagatgccaaatcatcaagttcttgtcaccgtaattaag
cgtaacttagcgcttgattttttcccacaatcaaccaaggctgttggcatcaatccggtt
tctcttgcatctgtgcggaggcgctgtgaattgatgtgcaagttcttgctcgagaggata
ttgcaggttgaggaaatgaacaatgacgaagttgaggcgcgtacacttccgtatgtgctt
ctcttgcatgctttttgtgttgtggatcctacattatgtgctccggctactgatccttcc
cagtttgtggtcactctacagccgtacctaaagactcaggctgacaatcgtgcagtagca
cagctactggagagcataatctttgtaattgattctgttctgcccttgcttcgaaagctt
cctcaaaatgttgtggaagaacttgaacaagatctgaagcagatgattgttcgccattct
ttcttaaccgttgtccatgcctgcatcaagtgcctgtgctctctgagtagagtggcaggg
aaaggttcagctgtcgttgagtatctcatccaggtgtttttcaagcatttggatgcctta
gggtttgacaacaaacagcaagttgggcgatctcttttctgtcttgggttgcttattcga
tatggtaactctttgctgagcacatcctgcagcattgaccaaaatatcgacgtcaagaac
agcctcaagttgtttaaaaaatatcttcatgcagaggattttataataaaggccagatct
ttgcaggcattaggttatgttttaatcgctaggccagaatatatgttggaaaaggatgtt
gggaaaattttagaggcaacactctcctccggtactgacgtacgtctcaagatgcaagcg
ttgcaaaacatctacgagtatcttcttgatgcagaaagtcaaatgggaacagaaaaaacc
agcaatgttgccggtcatcccatggatgctggccatagtgttcctgttgctgctggtgaa
ggtgataccaatatctgtggcggaataattcaactgtattgggataacatcttgggaaga
tgtttagatgaaaatgaacaggttcgccaatctgctgtgaagattgtcgaaattgtgctg
cggcaaggtctagttcatccaattacctgtgttccattccttatagctcttgaaacagat
cctcaggagggaaactcaaagctggctcatcatctgttgatgaatatgaatgaaaagtat
ccagcattttttgaaagccgtttgggagatggccttcagatgtcctttattttcattaga
tccatgtctggaagttctgaaaatccaaaccctagagtccaactcaaggtacctgagagt
atgaaagggacattcgagagtggctctttcacttatgcaagacttggtgtttctcgaatc
tacaagctgatccgtgggaatcgcatctcaaggaacaaatttatgtcttcagttgttcgt
aaatttgacactccaatttggaataattcagtcatcccatttctgatgtactgcactgag
atccttgctttacttcctttcacattgcctgatgagcctctttacttgatatatgccata
aatcgagttatacaagttagagctgggacactggaggcaaatatgaaagcgtttctgcat
ttgtggcaagaagatgcaaagaaacttaatggtaatgggacaactcagccccaggggcca
tcctgtcaacctgtgtgcgatcaaacaatacccatggatcttaatgggacacttgaagta
gaattcggtgatcagcctgtgtctaatcactctgagcctatgtatcaaaatttgcgtcct
aggaattcgtacaacaattaccacatatctgaagatgatatgcagaaaatccaggcagat
tgtctttcagccacggcattacaacttcttttgaaactaaagaggcatctgaaaatattg
tactctctaaatgatgcacgatgtcaggagttctctccaactgaacccataaaaccgggg
gaggttctctcaaggcagaacatttccttcaacataactgaaacacgcaccgagctgcct
acgactcatgaagaagtgttgcaaagatatcaggaattcaaaactgctttgaaggaagac
actgttgactattcaacatacacggcaaacatcaagaggaagcgccctcctccttccagg
agagggggaaggtctggccgcatggccggaagggacgatgaagattacgatgacgatgag
gattggggaagtggggtccggaggccaaataacagcgggaggaaaagcagtagaggcagg
cagtggtcgtag
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integrated database retrieval system
