Rhododendron vialii: 131302264
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Entry
131302264 CDS
T09330
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rvl
Rhododendron vialii
Pathway
rvl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131302264
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131302264
Ion channels [BR:
rvl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131302264
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3382
IQ
TMEMspv1-c74-12
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
131302264
NCBI-ProteinID:
XP_058184789
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Position
10a:complement(4702219..4709422)
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AA seq
702 aa
AA seq
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MPSILSRWFGIFRRRISSPDRNDGTDASAESPISYSVECYACTQVGVPVFHSTSCDRAHQ
PEWEASAGSSLIPIKNRPGRKPSRTAGAQKASGPFGSVLDPRSKRVQRWNRVFLLARGMA
LAVDPLFFYALSIGRGGAPCLYMDGGLAAVVTVIRTCADAVHLCHLWLQFRLAYVSRESL
VVGCGKLVWDARAVASHYVRSLKGFWFDVFVILPVPQAVFWLVVPRLIREEKIKLIMTIL
LLIFLFQFLPKVYHSICLMRRMAKVTGYVFGSIWWGFGLNLIAYFIASHVAGGCWYVLAI
QRVASCLRQQCDQKTLCKLSLSCSEEICYQFLSPAQTLGNPCGGNVTTVIRKPMCLDENG
PFRYGIYKWALPVISSNSLAVKVLFPIFWGLMTLSTFGNDLEPTSHWLEVIFSICIVLSG
LMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSQLRQRVRHFERQRWTAM
GGEDEMELIKDLPEGLRRDIKRYLCLDLIRKVPIFQSLDDLILDNICDRVKPLVFSKDEK
IIREGDPVQRIVFIVRGRVKSSQMLSKGMEATSMLEPGGFLGDELLSWCLRRPFHERLPA
SSATFTVLESTEAFGLDANNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLGW
RRYVVRTKGPVNHAAENGGGGERRLRRYAAVFMSLRPHDHLE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgccatccattctctctaggtggttcggaatattccggcgacgaatttcatccccagac
cgaaacgacggcaccgacgcctccgcggagagcccaatttcctattccgtcgaatgctac
gcctgtacacaagtaggcgtcccggttttccactccactagctgcgaccgggcccaccaa
cccgaatgggaggcctccgccggctcatcgctaatcccgataaagaaccggcccggaagg
aaacccagccggaccgccggggcccagaaagcgtcaggtcctttcgggtcggtgttggac
ccgcgcagcaaacgggtccagaggtggaaccgcgtgttcctgctggcgcgcggcatggcg
ctggctgtcgacccgctgttcttctacgctctctccatcggccgcggcggcgcgccctgc
ctgtacatggacggcgggctggcggcggtggtgacggtgatccgcacgtgcgcggacgcg
gtgcacctgtgccacctgtggctgcagttcaggctggcgtacgtgtcgagggagtcgctg
gtggtggggtgcgggaagctcgtgtgggatgcgcgcgcggtggcgtcgcactacgtcagg
tcgctcaaggggttctggttcgacgtcttcgtcatactgccggttcctcaggctgtgttt
tggttagtggtgccgaggctgatacgagaagagaagataaagctgataatgacgatactt
ctgctgatattcttgttccaattcctccctaaagtttaccacagcatttgtttgatgagg
agaatggccaaagtcactggctacgtttttggcagtatttggtggggttttggccttaac
ctcattgcttacttcattgcctctcatgttgctggaggatgttggtacgtactcgcgatt
caacgcgtagcgtcatgcctaaggcagcaatgcgatcagaaaacgttgtgcaagctctcg
ttgtcgtgctcggaggaaatttgttaccagtttttgtcgccggcgcagacattgggaaat
ccgtgtggcggtaacgtgacaacggtgatcagaaagccaatgtgcttagacgagaacggg
ccctttcgatacggcatctacaaatgggctcttccagtcatttccagcaactccctagct
gtcaaggttctttttcccattttttggggtttaatgaccctcagcacttttggcaatgat
cttgagcccacaagtcactggctagaagttatattcagcatatgcattgtcctcagtggc
ctaatgctattcaccctattgattggaaatattcaggtatttttgcacgcggtcatggcg
aagaagaggaaaatgcagctgagatgccgcgatatggagtggtggatgaggcggagacag
ctgccgtctcagttgaggcaaagagtccgccactttgagaggcagagatggacagcgatg
ggaggagaagatgagatggagctgattaaagacttgccggaagggctccggcgtgacatt
aagcggtacctttgcctagacttgataagaaaggtacctatcttccagagtttggacgat
cttatcctcgacaacatttgcgaccgcgtgaagcctcttgtattctctaaagatgaaaag
atcattagagaaggcgacccagtccagagaattgtgttcatagtccgtggaagagttaaa
agcagccaaatgctaagcaaaggcatggaagccacaagcatgctagagcccggaggattt
ctaggtgatgagttactctcgtggtgcctccgccgtccattccatgaacggcttccggct
tcatcggcgacattcaccgtcctcgaatcaacagaggcgtttgggcttgatgcaaacaac
ctccggtatatcaccgaccacttccgatacaaattcgccaacgagaggctcaagcgaacg
gcgagatactattcctccaattggaggacttgggcggccgtaaatatacaacttggctgg
cgtcggtacgtggtgaggactaagggtccggtgaatcacgcggcggagaatggtggtggt
ggtgagcggcggctccggcgatatgctgctgtgtttatgtcactcaggccgcatgatcac
cttgaataa
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