KEGG   Rhododendron vialii: 131303127
Entry
131303127         CDS       T09330                                 
Name
(RefSeq) uncharacterized protein LOC131303127 isoform X1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
rvl  Rhododendron vialii
Pathway
rvl03022  Basal transcription factors
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    131303127
  09124 Replication and repair
   03420 Nucleotide excision repair
    131303127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rvl03021]
    131303127
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131303127
Transcription machinery [BR:rvl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     131303127
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     131303127
SSDB
Motif
Pfam: MAT1 Phage_scaffold CAK-anch_MAT1 DUF5721 CHASE3 DUF5962
Other DBs
NCBI-GeneID: 131303127
NCBI-ProteinID: XP_058185906
LinkDB
Position
1a:2455385..2477668
AA seq 194 aa
MVVVNPFSKEMAIRKRIASIFNKREEDFPSLREYNDYLEEVEDMTFNLIEGIDVPAIEAK
IAQYQKENAEQIINAQARKAEEYAAALAASKGHHDSDPVRKLRTTSQSFQGGVGAGAQGY
YAPAVAGGAIGQPRPTGMAPQPIPIGLNPDMDAYNYDNEEMTRLRAERGGRAGGWSLELS
RKRALEEAFCSIWI
NT seq 585 nt   +upstreamnt  +downstreamnt
atggttgtcgtcaatcccttctccaaggagatggccattcgcaaaagaatcgccagcata
tttaataaaagagaggaggatttcccatcattgagagagtacaatgattacttagaggaa
gtggaagatatgacgttcaatttgattgaaggaatagatgttcctgctattgaggcaaaa
attgcacaataccagaaagaaaatgctgaacaaataattaatgctcaagcccgcaaggct
gaagaatatgctgcagctttagccgcaagcaagggacaccatgatagtgatccagtgaga
aaattacgtaccacgagccagagctttcaaggaggtgtcggtgcaggtgcgcaaggttat
tatgcccccgcggttgcagggggggcaattgggcagccacggccaacaggcatggctcca
cagcccattcctattggattgaacccggacatggatgcctacaattacgacaatgaagaa
atgacgagactcagagcagagagaggtggaagggcgggagggtggagcttggaattgagc
aggaaacgggcactcgaagaagccttctgtagcatttggatttga

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