Rhododendron vialii: 131303328
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Entry
131303328 CDS
T09330
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00600
Sphingolipid metabolism
rvl01100
Metabolic pathways
Module
rvl_M00094
Ceramide biosynthesis
rvl_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
131303328
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvl01007
]
131303328
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
131303328
Amino acid related enzymes [BR:
rvl01007
]
Aminotransferase (transaminase)
Class II
131303328
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
131303328
NCBI-ProteinID:
XP_058186122
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Position
10a:10313537..10329951
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AA seq
485 aa
AA seq
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MNSLSSFMDMVNRTLDMVTFAFEAPFARAVVFGVPIGGHLFVEGLLLVVIVFLLSQKSYK
PPKRPLTKKEIDELCDEWVPESLVPPITEEMHCEPPVLESAAGPHAMINGKEVVNFASAN
YLGFVGHEKMLESCTSSLEKYGVGSSGPRGFYGTIDVHLDCEGRIAKFLGTPDSILYPYG
LSTMFSAIPAFCKKGDIIVVDEGVHWGIQNGLYLSRSTIVYFKHNDMESLQSTLEKVTFE
NNRAKKLRRYIVVEAIYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSIGVLGSFGRGLTE
HYGVAVEKIDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAIT
ALDILEENPDLITKLKKNISVLCKGLSDVQGLEVASDALSPIVFLRLKNSSGSLKNDLQL
LDEIADRALKEDSVFVVTSKRSTLDKCRLPVGIRLFISAGHSESDLLKASGSLKRVAALV
LAAHD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaattcactgtcatcttttatggatatggtaaatcgtacattggatatggtcacattc
gcatttgaagctccgtttgctcgagctgttgtttttggagtgcccattggtggtcatcta
tttgtggagggtcttcttcttgtggttattgttttccttctttcccagaaaagttacaag
cccccaaaacggcccttaacaaagaaggaaatagatgagctatgtgacgaatgggttcca
gaatccctcgtacctccaattacggaagagatgcactgtgaacctccagtactagaaagt
gctgcagggccacatgctatgatcaatggcaaagaagttgtgaactttgcttcggcgaat
taccttggatttgtgggacatgagaagatgcttgagtcatgtacatcgtcattggaaaaa
tatggtgttggttcttctggtcctcggggattttatggaacaattgatgttcaccttgat
tgtgagggaagaatagctaaatttctgggaactcccgactccatactttatccttatgga
ctttccaccatgttcagtgcaattccagctttttgcaagaagggagatatcatcgtcgtg
gatgagggtgtccattggggaatacaaaatgggctctatctttctagaagtacaattgtg
tattttaaacacaatgatatggagtctctacaaagtactttagagaaagttacttttgaa
aataatcgagctaagaagctaaggcgctacattgtggttgaggccatttaccagaactca
ggtcaaattgctccattggacgagattatacggctgaaagagaaatatcgcttccgtgtt
ctattggatgagagcaactcgattggcgtccttggcagttttggaagaggtctcacagaa
cattatggggttgcggttgagaagatagacatcataactgctgccatgggacatgcttta
gccacagaaggaggattctgcacgggaagtgctagagtcattgatcaccaacgtttgagc
agttctggttatgtcttttctgcttccttgcccccataccttgcaagtgctgctattact
gctcttgatattctggaggaaaatcctgatcttattactaaattgaagaaaaatatttcc
gtgctatgcaaaggattgtcagatgtccaaggccttgaggttgcaagtgatgcactatcg
ccaattgtttttcttcggctaaagaactcctcaggttccttgaagaatgacctgcagctg
ctcgatgaaattgccgatcgggcattgaaggaggattctgttttcgtagtgacttccaaa
agatcaacacttgataaatgtcgtctacccgtgggtatcagattattcatctccgctgga
cattcggaatctgatctgctgaaagcgtctggttcgctgaagagagttgcagcactagtt
ttagctgcgcacgattga
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