Rhododendron vialii: 131303335
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Entry
131303335 CDS
T09330
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131303335
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131303335
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
131303335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_2
Rtf2
HAD_2
zf-C3HC4
zf-C3HC4_3
PRT6_C
Prok-RING_4
RING_XB3-XBAT31
Pellino_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
131303335
NCBI-ProteinID:
XP_058186130
LinkDB
All DBs
Position
10a:complement(10487865..10499750)
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AA seq
386 aa
AA seq
DB search
MELNTTKDAFDRVTKKQKLSTTKSQELIELLGQEIENALSKLQSSPDTTSQPDHNVILSE
LKSKLSEIAPLSQMEGTQKELNIALSKYPKILEKLFNPDIAKAYRSVDFDTHTINQIIAN
HFYREGMFDLCDCFVNEAKETEAATMRTPFMEMYEILNAMKSRDLKPALTWAAANRDKLK
QNGSHLDLKLHRLQFVEILQTRGRDEALNYAKTFLVPFALDHMAEFQKLMACLLWAGRLD
ISPYADLLLPTHWDDLIEEVNRQFCNILGQPFQSPLSVTVAAGVQGLPTLLKLMNVMMGK
KQEWQSMKQLPVPVDLDTEFQFHSVFVCPVSREQASEENPPMLLSCGHVLCKQSITKLSK
NNSTRPFKCPYCPSEVEVSKCRQLYL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaataccaccaaagatgcatttgatcgtgtcacaaagaagcagaagctatcc
actacgaaatctcaagaactaattgaactgcttggccaagagatagaaaacgcattgtca
aaactccaatcatcccctgatactacttcccaaccggatcataacgtgatcctgagtgaa
ctgaaaagcaaattgagtgagattgctccactcagtcagatggaaggcacgcagaaagaa
ctcaatatagccctgagcaagtatccaaagatccttgaaaaattgttcaaccccgacata
gcaaaagcttatagaagtgtcgactttgatactcacacaattaaccagataattgctaac
catttctatcgggagggcatgtttgatctgtgtgattgctttgtaaacgaggccaaggaa
acagaagcggccacaatgcgaactcctttcatggaaatgtatgagatactcaatgccatg
aaatctagggacctaaagccggcactgacctgggctgctgccaaccgtgacaaactgaag
caaaacggatcccaccttgatttgaaacttcaccgtttgcagtttgtggaaatacttcag
accagagggagagacgaagcgctcaactacgctaaaactttccttgttcccttcgctttg
gaccacatggctgaattccagaagctaatggcatgtctattgtgggctggaaggcttgat
atttccccctacgctgacttacttttgccaacccattgggatgatctgatcgaggaggtc
aaccgtcagttctgtaatattcttggacagcctttccagagcccgttgagcgtgacagtt
gctgctggagtccaagggttgccgacacttctgaaactgatgaatgtgatgatggggaag
aagcaggagtggcagtctatgaagcagttgcccgtgccagtggatctggacacggagttt
cagttccattcggtgtttgtgtgtccagtgtctcgggagcaagcgagtgaagagaatccg
ccaatgttgttgtcgtgtgggcacgtgctgtgtaagcagtccataacgaagttgtccaag
aataacagcacaaggcctttcaagtgtccgtactgtccgtcggaggttgaagtttctaaa
tgtaggcagttgtacctctga
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