Rhododendron vialii: 131303427
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Entry
131303427 CDS
T09330
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
rvl
Rhododendron vialii
Pathway
rvl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131303427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131303427
03029 Mitochondrial biogenesis [BR:
rvl03029
]
131303427
Membrane trafficking [BR:
rvl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131303427
Atg1 complex
131303427
Mitochondrial biogenesis [BR:
rvl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131303427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
131303427
NCBI-ProteinID:
XP_058186275
LinkDB
All DBs
Position
10a:complement(28927431..28936258)
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AA seq
635 aa
AA seq
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MASSHGHTQSEPAKMEQIIIELFAKSRQIILESRCPHVSSRNYSGEQVILSPSSSSSSSS
SVTTRDKWFNLALRDCPAALENIDFWRESYLEPMVIDIILLQGRSGLDPMSSSPRRGIVR
NLSAKEQFSNIWNSEVNEFGHEVKTEKIIERWVVQYENGKSGRDCTSGSKRSTGNSLPTS
YKKSILLLRLLYYMIRLLPAYKLFRNLISTGQILKFNLTHRVSSFVEPFTRQEESEMQKF
EFVPVETFCGRLCLSVSYYSSLSDVNSEPSTPTTPQFIQDYVGSPLACPLKRFPSIPRCS
QSSSPFGRHHSWSDDIHRVAPPSPTNSDSHASVSKPSSHCIPPTNLLLHFPDTPQLHENS
SNTDVYWPSVFTPSPSQSPPAYIPSSHVSKVLLQSESAPVSIPESKLGSAPLSNIYQNLP
PSPPLKVTRPGASKTEKSSDLAQNRSTVEKLLSFRKNESGSCFGLKLSSNSPLRKSISRT
SSRLSFQEDFADSEFSGPFAVDDVDMVDRGSRPASFDQKGHPCEPLEPGGLFQVRKTQDA
AVAALFHMLKRAPPLRLDFSSSINSPESSRPLTSTEQNIKSDPPRVQCVAAAVSVASSGH
ILPKTTANALDELRGYMDTKDSLATQGMRSIILTK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctcatggtcatacgcagtcagaacccgcgaaaatggaacagataatcatt
gaattgttcgcaaaaagtaggcaaattatccttgaatcgaggtgtccccacgtatcatct
cgtaattatagtggagaacaagtgatattgtccccctcttcgtcctcatcatcgtcttct
agtgttacaacaagggataaatggttcaatttagcactgagggattgtccagcagctcta
gagaacattgatttttggcgtgaaagttatcttgaaccaatggtgattgacattatttta
ctgcaaggaagaagtggtctggacccaatgagtagttcccctagaaggggcattgtaaga
aatttgtcagcaaaagagcagttttcgaatatttggaattcagaagttaatgaattcgga
catgaggtgaagactgaaaaaattatagagagatgggtagtgcagtatgaaaatggaaag
agtggtagagattgtacttctggaagcaagaggtcaactggtaatagtttgcctacgtct
tataagaaatcaatactgcttttaaggctattgtattatatgattagacttttgcctgct
tataaactctttcgcaaccttatttcaactggtcaaattctcaaatttaacctaactcat
cgggtgtcctcttttgttgagccattcacccgtcaagaagagtcagagatgcagaagttc
gagtttgtgcctgtggaaactttttgtggtaggctttgtctctccgtgtcctattattct
tccctctctgatgtgaattctgaaccgtcaacacctacaaccccacagtttatacaggat
tatgttgggagtccattggcatgcccgttaaaaaggttcccatccattcctcgatgttct
cagtcttcctctccctttggaaggcatcatagctggagtgatgatattcacagagtggca
cctccttcacccacaaactccgattcccatgcttcagtttctaaaccaagttcccattgt
atccctcctacaaacttgctgcttcattttccggatacccctcagcttcatgaaaacagt
agcaataccgatgtgtattggccttctgtttttacaccctctccatcccagtcgccacct
gcctatattcccagtagccatgtatctaaggttctgttgcagtctgaaagtgctccagtt
agcatacctgaatctaagcttggtagtgctcctttgtcaaacatttatcaaaatttgcct
ccttcgcctcctctgaaggttacaaggcctggtgcttccaagacagagaaaagttctgat
ctggctcagaacaggtcaacagttgagaagctgctttccttcaggaaaaatgaaagtgga
agctgttttgggctgaagttatcatccaacagcccattgcggaaatcaatttccagaacc
tcgagtaggttgtctttccaggaggattttgctgattctgagttttctggccccttcgct
gtggatgatgttgacatggttgatagaggtagcagacctgcatcttttgatcagaaagga
catccatgcgagccacttgagcctggaggattgtttcaggtcagaaaaacccaagatgct
gctgttgctgctctttttcacatgttgaagagggccccacctctccgccttgacttctcc
agttctattaactcgccggaatcctctaggcctctaacctcaactgagcaaaatataaaa
tctgacccgccaagggttcaatgtgttgctgctgctgtaagtgtagcatcttctgggcat
attttgcccaagacaacagccaatgcattagatgagctcaggggatatatggatacgaaa
gactcgttggctacgcaaggcatgcgatccattatactgacaaaataa
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