Rhododendron vialii: 131303689
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Entry
131303689 CDS
T09330
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131303689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvl03032
]
131303689
Enzymes [BR:
rvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131303689
DNA replication proteins [BR:
rvl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
131303689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_exo2
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
131303689
NCBI-ProteinID:
XP_058186659
LinkDB
All DBs
Position
10a:complement(16653608..16668822)
Genome browser
AA seq
1548 aa
AA seq
DB search
MADEQPTVAGRRRSRGSVSSSRSEALERLKSLRGGDRRGGGYQIKMEDPIYDTVADDEYD
ALVSKRREEFRGFIVDDDGLGYGDEGQEEDWTMAGVPLSDESEGEIERPNKQKKKAAAEK
KKDPSQPPKKPSALSTAAALMGKQRLSNMFTTSAFNKKSSSSNRKDDKGNNLSCDSIVDD
IIAEFAPDESDRERRRRGHSNLVSGFVSTTSTTRSIKNENPTFDSVDRTVKREPARASSN
EEQEIVGAKESELIREAETGMDLDSKISGDSGLQLVECSTRGLVDKESMVNGIEAKVEPE
VKEGGFTLNAMIKEEKNPALSATAGWQAVRNAGNGSIGLDGGEMNPALNSEEKPDFELDS
DGSLPFYILDAHEEFYGANAGNVYLFGKVKAGSTYSSCCVIVKNMQRCVYAIPNGSLFQY
DIIMKLEKDVEESLISSTCFRSKLQEMASGLKIEIAKQLLDRNVSSFSMAPVKRSYAFER
PDIPIGENYVLKINYPFRDPPLPSDLKGELFSALLGTHNSALELFLVKRKIKGPSWLSIS
KFSNCPAQRVSWCKFEVVVDCPKDIQISSSSKNSAVIPPVVVTAINLKTIISEKQNVNEI
VSASIICCHKAKVDTPTLASEWTRPGMLSHFSVVRKLDGGIFPMGFTKEINDRNSLSGPN
VISIESSERALLNRLMIELHKLDSDVLVGHNISGFDLDVLLHRAQACRVPSNMWSKIGRL
KRSAMPKLTKGSTIFGSGASPGIMSCIAGRLLCDTFLSSRELLREVSYSLTHLAKTQLKK
DRKEIAPHDIRLMFQSSESLMDLIECSETDAWLSVELMFHLSILPLTRQLTNISGNLWGK
TLQGARAQRVEYLLLHAFHAKKYIVPDKFSPYPKETKVMKRKVNDAENKEIDGLDVDNAN
FENDSTNSDHGKAKKGPSYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVQ
RPADGSVPRLPSSKKTGVLPELLKNLVERRRLVKSWLKNASGLKVQQLDIQQQALKLTAN
SMYGCLGFSNSRFFAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYTGLD
DIGKAKVIAGKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQSKDGTLHEDIER
KGLDMVRRDWSLLSKKLGDFCLDQILSGGSCEDVVESIHKKLMEVQEEMRNGQVPLEEYV
ITKSLTKPPEAYPDAKNQPHVEVALRLKRNGHSTGCSAGDTVPYVICCEQGASSDTSTGI
AQRARHPDELKRDNGKWMVDIAYYLSQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQ
SKSSDGVDNDASSLLLCGVNDDERYGGCEPLTLSCPSCSGTFECPTVLSSIRALISDKKT
DSKSEESSQSFWHNLHCAKCPDEGDVGRISPALIANQVKRQTEGFISTYYKGLMTCDDET
CKYMTRSLNLRVIGDSERGTVCPNYPRCNGHLIRKYTEADLYKQLTYFCHVLDTVRCIEK
IEHNIRIPAEKELARIRPLVDLAASTAQRVRDRCAFGWVQLKDLIVTI
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcagccaacagtggccggaaggcgcaggagcagaggatccgtctcctcg
tcacgctccgaagccctagaacgcctgaaatccctccgcggcggcgaccgccgcggcggc
gggtaccagatcaagatggaagaccccatctacgacacggtcgccgacgacgagtacgac
gccctcgtctcgaagcgtcgcgaggagttccgagggttcatcgtcgacgacgatggcctc
gggtacggcgacgagggccaggaggaggactggaccatggccggagtccccctctccgac
gagtccgagggcgaaatcgagagacccaacaagcagaagaagaaggcggctgccgaaaag
aagaaggatccgtcacagccgcctaaaaagccctcggctctgtccaccgcggccgcgttg
atgggtaagcaacgcctctccaatatgttcactacttctgcttttaataagaagagtagt
agtagtaatagaaaggatgataaggggaacaatttgtcttgtgatagtattgttgacgat
attattgccgaatttgcccctgatgagtccgaccgggagaggcggcggagggggcactcg
aatttagtctcagggtttgtgagcactacttctactactaggtcaattaagaatgaaaac
cctacttttgatagtgttgataggacggttaagcgcgagccagctagggctagttcaaat
gaagaacaggaaattgtaggggccaaggagagtgagttgataagggaagctgaaactgga
atggatttggattctaagatcagtggcgattcgggtttgcaattagttgaatgttcaacg
agggggttggtggataaggagagcatggtgaatggaattgaagcgaaggtggagccggag
gtgaaagaggggggttttactctcaatgccatgatcaaggaggaaaagaatccggcattg
agtgcaactgctgggtggcaggcggttaggaatgcaggaaatgggagtatcgggctcgat
ggaggtgagatgaatcctgctttgaacagtgaagagaaacctgattttgagctagattcg
gacgggtcattgcctttctacatacttgatgctcacgaggagttttatggtgctaacgcg
ggtaacgtttatctgtttgggaaggttaaagcaggaagcacatactccagttgctgtgtg
attgtaaagaacatgcaaagatgcgtctacgcaattccaaatggatctctgtttcagtat
gacattattatgaagcttgagaaagatgttgaagagtcgctaatttcttctacatgtttt
cgttccaagttgcaagagatggcatcaggattgaagattgaaatagcaaaacagttattg
gatcgtaatgtttcaagttttagcatggctcctgttaagagaagctatgcatttgagcga
cctgacatacctattggggaaaattacgtcctcaagatcaattatccctttagggaccca
ccacttccttcagacctcaagggggaactgttctctgctttgcttggaactcataacagt
gctttggagctatttctagttaagaggaagataaagggaccttcctggctatcaatttca
aaattttccaactgcccagctcagcgtgtaagctggtgcaagttcgaggtggttgttgat
tgtccaaaggatatacaaatttcaagttcctcaaagaattcagcggtgattcctccagtt
gttgttacagcaataaatctgaaaactatcatcagtgaaaaacagaacgtgaatgaaatt
gtatctgcatctataatctgctgccacaaggccaaggttgacactcccacattagcctca
gaatggacgaggccagggatgcttagccacttttctgttgtccgtaagcttgatggaggc
atatttccaatgggatttactaaagagatcaatgatagaaattcattgtctggaccaaat
gtcatcagcattgaaagcagtgagagggctttattaaaccgtctgatgattgaactacac
aaattagacagtgatgttcttgttgggcacaatatttctgggtttgatctggatgtgctg
cttcatagagctcaggcttgcagggtccctagcaacatgtggtccaaaataggccgtctc
aagcgctctgcaatgcctaagcttactaaaggaagcacaatctttgggtctggtgccagt
ccagggattatgtcctgcattgctgggaggcttttatgcgacacatttttgtcttctcgt
gagctgttgagagaggtcagttattctttgacacacctggcaaagactcagctgaagaaa
gaccggaaggagattgcgccacacgatattcgcttgatgtttcaaagttctgaatccctt
atggatcttattgaatgtagtgaaactgatgcatggttatctgtggaactcatgtttcat
ttgagtattcttcccctcactcgtcaactgactaatatcagtggtaacctctggggtaaa
actctccagggtgctagggcgcaaagagtagaatatcttttgctgcatgcattccatgca
aagaaatatattgtcccagacaagttttctccttatccaaaggagacaaaagttatgaaa
cgtaaagtgaatgatgctgagaacaaggaaattgatggtttggatgtcgacaatgcgaat
tttgagaatgattcaacaaacagtgatcatggaaaagccaaaaaaggaccttcttatgca
ggtggattggtcttggagccaaaaagagggttgtatgacaaatatattttacttctggac
ttcaatagtctttacccctctataattcaggagtacaatatatgcttcacaactgttcaa
agacctgccgacggttcagttcctcgtttaccatctagtaaaaagactggagttttgcca
gagttgctgaaaaatttggtcgagagaaggagactggtgaagtcatggctaaaaaatgca
tccggtcttaaggtccaacagcttgacatacagcagcaagcactgaaactcactgctaac
agtatgtatggttgcctggggttttccaactccagattctttgcaaaaccgcttgcagaa
ctgataacactacaaggaagggagatccttcaaagtactgttgatctagttcagaataac
ttaaacttagaggtgatatatggtgatacagattcaatcatgatatacactggccttgat
gatatcggaaaagctaaagtgattgcaggaaaggtcatccaagaggtcaacaaaaaatac
aggtgtttagaaattgaccttgatggcttgtacaagagaatgctgcttctcaagaaaaag
aaatatgcagctgtcaaagtgcagtctaaggatgggacactacacgaggatattgagcga
aaaggtcttgatatggttcgtcgtgactggagcttgctatcaaagaagctgggagatttc
tgccttgatcaaatactctccggagggtcatgtgaggatgtcgttgaatcaatacacaag
aaactcatggaggtacaagaggagatgaggaatggacaagtgccattggaggaatacgtc
atcacgaagtcattaaccaaaccaccagaagcctacccagatgccaagaaccagccacac
gttgaagttgcacttagactgaagagaaacggccactccactggttgctctgctggggat
acagttccttatgtaatttgttgtgagcagggggctagttcagatacttctacagggatt
gctcagcgagcaagacatccagatgaattgaaaagagacaatggaaaatggatggttgac
attgcttattacctgtcacagcagatccatcctgttgtatcacggctgtgtgcttcaatt
cagggtacaagcccagcacgtttggctgattgtttggggcttgactcatcaaagttccaa
agtaaatccagtgacggtgtcgataacgatgcttccagcttgctcttgtgtggagtaaat
gacgatgagcgatatggaggctgtgagcctttgactttatcttgtcctagctgctctggt
acttttgaatgtccaactgtgttgagttccattcgtgcattaatcagtgacaagaaaaca
gactcgaagtcagaggaatcctctcaatctttttggcacaatttgcattgtgctaaatgc
ccggatgaaggtgatgtgggcagaatatctccagcattgatagccaatcaggtcaagagg
caaacagaaggattcatttcaacatactataagggcttaatgacgtgtgatgatgaaact
tgcaagtacatgactcgaagtctaaacttgcgggtaattggtgattctgaaagaggaaca
gtttgtccaaattatcctcgctgtaacggccatctcataagaaagtacactgaagcggat
ctgtacaagcagcttacttatttctgccacgtgttggatactgtacgctgtattgagaag
atagagcataatatcaggataccagcggagaaagagctagcaagaatccgaccactggtt
gatttggcggcatcaacagcacaaagggtccgtgaccggtgtgcctttgggtgggtgcag
ctgaaggatctcattgtcacaatttga
DBGET
integrated database retrieval system
