Rhododendron vialii: 131303772
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Entry
131303772 CDS
T09330
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131303772
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131303772
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
131303772
NCBI-ProteinID:
XP_058186747
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Position
10a:complement(34665366..34675727)
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AA seq
673 aa
AA seq
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MEKAGWKRQWGLFVLLIVQLFFIVEVSGATPVRGPGSINSRELKSSLPPLRLHRLGHDYV
VMDNGIVMVTLSTPKGMVTRIQYEGIDNILEYNKETNRGYWDIIWATRESVLDGLHGTSY
EVITEDEDQIEISFPSKWDPSHRDIGRPLNVDKRFVMLRGSSGFYTYSIFERLEGFPAMT
IGQGRVAFKLQHKLFNYMAISDTRQRVMPTPYDRSNGQTLDYHEAVVLTNPSNPDLKGEV
DDKYQYSSDNKDNRVHGWISLDKGVGFWVITPSDEFRVGGPLKQELTSHVGPTSLSVFFS
NHYAGRTMSLAFQDGEPWKKVFGPVFIYLNSDSANKDPSSLWEDAKKQSVRETESWPYDF
PLSEDFPKAKQRGTVRGRLLVHDRYINRNLISASSAYVGLAKPGEVRSWQTENKGYQFWT
RADAEGHFVIKGIRPGNYSLYAWVPGIIGDYRNDYFINIAPGGEIRVRDLVYYPPRVGPT
LWEIGVPDRTAAEFFVPDPDSKRVNNLYTDHADKFRQYGLWDRYSDLYPNHDLIFTVGTN
SYQKNWFFAHVTRKQNNTYVPTTWRISFQLEHVRSGAYTLQLALASASMCELQVRVNNPR
AAYPHFTTRLIGRDNAIARHGIHGLYSLYSVDISSFQLVKGSNSIYLTQSRGGSPFSGLM
YDYLRLEGPPYAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcagggtggaagagacagtggggtttgtttgtgctcttaattgttcaatta
ttcttcattgttgaagtttctggggcgactccagtaagaggtccagggagcatcaatagc
cgagaactgaagtcatcacttcctccactccgtttgcatagattgggtcatgactatgtg
gtaatggataatggcattgttatggtcactttgtcaaccccgaagggcatggttaccaga
atacagtacgaaggaattgacaatattcttgagtataataaagaaaccaacagagggtac
tgggatattatttgggccaccagagaaagcgtattggatggtctacatgggacaagttac
gaggttattacggaagatgaagatcaaatagagatttcattcccaagcaaatgggatcct
tcgcacagagatatcggtcgccccctaaatgtagacaaaaggtttgtaatgttgcgaggc
tcgtccggtttttacacatactcgatatttgagaggttagagggatttcctgcgatgact
atcggccaagggagggttgctttcaagcttcagcacaagctgtttaattacatggcaata
tcggatacaaggcaaagggtgatgccaacgccttacgaccgtagcaatggtcaaacactt
gactaccacgaagctgtcgtgttgaccaatccatccaatccagaccttaaaggagaggtg
gatgataagtaccagtattcgtccgataacaaggacaaccgggtacacgggtggatatcc
ttggacaagggggtcgggttttgggtcatcacaccaagcgatgagttccgggtaggtggg
cctctcaagcaagagctcacttcccacgtgggcccaactagcttatcagtgtttttcagt
aaccattatgccggccggactatgtcacttgcattccaagatggagaaccatggaagaag
gtttttggtcctgtttttatctatcttaactccgattcagctaataaggatccatcttca
ctctgggaagacgcaaaaaaacagagtgtgagagaaaccgaaagctggccatacgatttc
cccctctcggaagactttcccaaagcgaaacaacggggtacagttagaggtcgattacta
gtccacgacaggtacataaacagaaatcttattagtgcaagttctgcgtatgttgggttg
gctaaacctggagaagtcagatcatggcaaacagaaaacaagggttaccagttttggacc
cgagctgatgctgaaggccactttgtgatcaaggggatccgacccggcaactatagcttg
tatgcatgggtccctggcattattggggattacagaaatgattatttcattaatatcgcc
ccaggtggggaaatcagggtgcgtgatcttgtgtattatcctccaagggtgggtcccacc
ttatgggaaatcggcgtaccggaccgcaccgcggccgaattcttcgtgcccgatcccgat
tcaaaacgagtcaacaatttatacaccgaccatgctgacaagttcaggcaatacgggttg
tgggaccgctactcagacctctacccgaaccacgatctcatcttcaccgtcggcaccaac
agttaccaaaaaaattggttcttcgctcacgttactaggaaacaaaacaacacctatgta
ccaacaacatggagaatttcatttcaattggaacatgtgaggagtggagcttatacactt
caactagccttggcatcggccagtatgtgtgaactgcaagttcgggtcaacaacccacgg
gcggcataccctcacttcacaacgaggcttataggaagggacaacgcgatcgcaagacac
gggattcacgggttgtattcactgtatagcgtggatatatcgagttttcagcttgtcaag
ggaagcaattcgatctatttgacacagtcaagagggggaagccctttcagtggactaatg
tacgattacctccggttagaagggcctccgtacgcaagttga
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