Rhododendron vialii: 131303787
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Entry
131303787 CDS
T09330
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2 isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131303787
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131303787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF12
B-prop_COPA_B_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
131303787
NCBI-ProteinID:
XP_058186779
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Position
10a:complement(27785597..27795570)
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AA seq
456 aa
AA seq
DB search
MRGGTVQINWHDTKPVLTLDFHPPSGILATGGADFDIKLWLVTSDEVQKKTPTASYQNSL
AYHGSAVNALRFSPSGEHLASGADGGELVIWKLHTTDVGQAWKVLKTLSFHRKDVLDLQW
STDGEFLVSGSVDNSCIIWDVSRGSVHQILDAHQHYVQGVAWDPLAKYIASLSSDRTCRI
YVNKPQSKAKGNEKMNYVCQHVIAKAEPQILDESKSVKHHLFHDETLPSFFRRLAWSPDG
SFLLVPAGSCRISPASEPVNTSYVFSRNDLTRPALLLPGASKPVVAVRFCPLAFRLRASN
SAAFFRLPHRLVFAVATLNSLYIYDTEGIQPIAILAGLHYAAITDIAWSPSGKYLALSSQ
DGYCTLVEFENDELGSPISLSVCSEGKKLVGDESKGAVQKPDDNGMEGSQNKGILSSDSG
KTEIEKDEGKQPSAPPVVTPLQNKPAKRRITPMAID
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtggaactgttcagatcaattggcacgacacgaagcccgtcctcaccctagat
ttccaccctccctccggaattctcgccaccggcggcgccgatttcgacatcaagctatgg
ctggttacttcggatgaagttcaaaagaaaaccccaacagcttcttatcagaatagcctt
gcttaccatggttcagctgtaaatgctcttcgcttctcaccttctggggaacaccttgcc
tctggtgctgatggaggtgagctggtcatatggaagttacacactactgatgtaggtcaa
gcatggaaagttctcaagacattatcgtttcaccgtaaggatgtgttggacctgcagtgg
tctactgatggtgaatttcttgtttctggatcggttgataattcttgcattatatgggat
gttagcagaggttctgtgcatcagatcttagatgctcatcaacattatgttcaaggtgtg
gcatgggacccgttggcaaagtacattgcttcattgagttctgatagaacttgccggatt
tatgtgaacaagcctcaaagtaaagcaaaaggaaatgagaagatgaattatgtttgtcag
catgtcattgcaaaggcggaacctcagattctagatgaatccaagtcagttaaacaccat
ctttttcatgacgagacgcttccatctttcttccgaaggttagcctggtctcctgatgga
tcatttttacttgtgcctgcaggttcttgcagaatctctccagcatctgaaccagttaac
accagttacgttttctctaggaatgatcttacaaggcctgctctactgctccctggtgcc
agcaaacctgtcgttgcagtgcgattctgccctttggcttttaggcttagagcttcaaac
tcagctgctttcttcaggcttccacatcgccttgtttttgcagtggctactttgaactct
ttatatatctatgacactgaaggcattcaaccaattgcaattttggctggactccactat
gcagccattactgatattgcttggtcaccgtcaggaaaatacttggcattgtcctctcaa
gatggttattgtactcttgtggaatttgaaaatgatgaactaggatcaccgatctcgtta
tcagtctgctcagaaggaaagaaattagtgggtgatgagagcaagggcgctgttcagaaa
ccagacgataatgggatggaaggatctcagaacaaaggcattctcagttctgacagtgga
aaaacagaaattgaaaaagatgaaggaaagcaaccatcagcacctccggtagttactccc
ttgcaaaataagcctgctaagcggcgcattactccaatggctatcgattga
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