KEGG   Rhododendron vialii: 131304053
Entry
131304053         CDS       T09330                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
rvl  Rhododendron vialii
Pathway
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    131304053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131304053
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      131304053
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 131304053
NCBI-ProteinID: XP_058187135
LinkDB
Position
10a:complement(34862007..34871595)
AA seq 986 aa
MRTRNQSKQRGQSTGKEVMAPADDSGFLESLDDGNLAAISHKAVGELLNRVNSRGSSGSK
KRDNYLQRCDFECKPVSEPEKVDEHSVGNKTKRNALEGENSKSAAVPTTPLKDTAEGKDL
HHSNLDGEEELDESFWEDGSLHTLNSVEDHKNDLFNGMTIEFDGTPDSGKRKTIRRASVE
DKELAVLVHKVHLLCLLGRGRLIDNACNNPLIQASLLSLLPKHLNRISENTNLTVNALVP
LVSWFHNNFRIRGSGSTERSFHSALAFALETQEGTAEEVAALSVALFRALNLTTRFVSIL
DVASLKPDTNKSESVSQEPRKTVRGIFQSSTLMVAKPDQVAISPVKQLSSDGKGNICETS
LRDACGAMHAKLSSNFSSSKGSQSSDLPTLSCKAGNHFSDGSLAGKSDGSKRKGDFEFEM
QLEMALSASAAETSRHSICLNADKIHSNSPNLSSPAKRLKTIKMVESPSSSQGISTAFGS
RKVGAPLYWAEIYCSGENLTGKWVHVDAVNAIIDGEHKVEPAVAACRASLRYVVAFAGLG
AKDVTRRYCMKWYKIASERVDPIWWGNVLAPLTALESGATGGVIHVERDGSNGHAKVGPF
KTTDPSSRNCTVPQNASSTGKVATEVPKEPCNKICSNSSAANSFINSRSSLEDMELETRA
LTEPLPTNQQAYKNHHLYALERWLTKYQILHPKGPILGFCSGHPVFPRTSVQLLHTKERW
LREGLQIKANELPVQVMKRSQKPSKGQASDADDDAEEACEGNTVLYGKWQTEPLCLPHAV
NGIVPRNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFDFRNGRSIPV
YDGIVVCAEFRNAILEAYAEEEERREALEKKRNEAQAISRWYQLLSSIVTRQRLNNCYGD
HSTSQTSNNIENTKEKVSEGVGGSEDNGRSHECEGQTLPRKSEFVSMVTTEEHEHVFLTD
DHDVDEQSFMRTKRCRCGFSIQVEEF
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgcgaaccagaaaccagtccaagcaacggggccaatccaccggtaaagaggtgatggca
cctgcagacgattcaggatttttggaatcccttgatgatggaaatctcgcggctatatcc
cacaaggcggtaggggaacttctaaatcgggtgaattcacgtggctcgtcagggtcaaag
aagcgagataactacctccagcggtgtgattttgaatgcaaaccagttagcgaacctgag
aaggttgatgaacacagtgtgggaaataagacaaaacgaaatgccttggagggtgaaaat
tctaaaagtgctgcagtacctacaactccattgaaagacacagctgaagggaaagatctt
catcattctaatcttgatggtgaagaagaattggatgagtcgttttgggaagatggatct
ttacatactttgaattctgtagaagatcacaaaaatgatttatttaatggaatgacaata
gagttcgatgggacaccagattctggtaaacggaagacaattcgcagagcttctgttgag
gataaggaattggctgtgcttgtgcacaaggttcatttgctttgtttacttggacgggga
aggttaattgacaatgcgtgtaacaatccactcattcaggcttccttactttcccttcta
ccaaaacacttaaataggatatcagagaacacgaatttgacggttaatgctctggtgccg
cttgtcagttggtttcacaataacttccgtattagaggttcgggcagtacagagagatca
tttcattcagctttggcatttgctctagagactcaagaagggactgcagaggaggttgct
gcattgtctgtggcactatttagagctctgaatcttacaacccggtttgtgtccattctt
gatgtggcatccttgaagcctgatactaacaaatctgaatctgttagccaagagccaagg
aagactgtgagagggatctttcagtcttccacgctgatggtggctaaaccagatcaggtt
gctatttctcctgttaaacagttgtcgtcagatggcaagggcaacatctgtgaaacttcc
ttaagggatgcatgcggggctatgcatgccaagttgtctagcaatttctcctcgtccaaa
ggttctcaaagttctgatctgcccacattatcttgcaaggcaggaaatcatttctctgat
gggtcccttgctgggaaatctgatggatccaagagaaaaggggattttgaatttgagatg
cagttggaaatggctctatctgcttcagcagctgagacttctagacacagtatttgcttg
aatgcagacaaaattcatagtaattcgccaaatctctcttctcctgctaaaagattgaaa
acaattaaaatggtggaatctccatcatcttctcagggtatctctactgcatttggatca
agaaaagttggagctcctctttactgggcagaaatctactgcagtggagagaacttgaca
ggaaagtgggtgcatgttgatgctgtcaatgctattattgatggcgaacataaagtagaa
cctgcagttgctgcatgtagagcttctttgagatatgtagttgcctttgcaggccttgga
gctaaagatgtgactcgcaggtattgtatgaaatggtacaagatagcgtcagaacgagta
gatccaatttggtggggcaatgttttggcaccattgacggcgttggagtcgggagctact
ggaggtgtgattcatgtggaaagggatggttctaatggacatgccaaagtgggaccattt
aaaactactgatccttcatcccggaactgtactgtcccccaaaatgccagctcgactggg
aaggtagcgactgaagtgccaaaagagccttgtaacaaaatttgttcaaattcttctgca
gcgaattcttttattaattccaggagctctcttgaggacatggagttggaaactagggca
ttaactgagcctcttcctaccaatcaacaggcttataaaaaccatcacctttacgcgcta
gaaagatggcttacaaagtatcagatccttcatcctaaaggtcccattttgggtttctgc
tcaggtcatccagtcttcccaaggactagtgtccaattactccatacgaaagaaaggtgg
ctgcgtgaagggctgcaaatcaaagccaacgagcttcctgtacaggttatgaaacgttct
cagaaaccaagcaaaggtcaagcttctgatgctgatgatgacgctgaagaggcttgtgaa
ggaaatactgtgctttatgggaagtggcaaacagaacctttgtgtctgcctcatgcagtg
aatgggattgttcctaggaatgaacggggccaagtggatgtttggtctgagaagtgcctt
ccaccgggaactgtacacttgaggttgccgcgactagttccagttgctaagcggctagaa
attgattttgcacctgctatggttggatttgacttccgaaatggtcgctctatacctgtc
tatgatggcattgttgtttgtgctgagtttcggaatgcaattctagaggcctatgcagag
gaagaagaaagaagagaggctctagagaagaaaaggaatgaagcgcaagctatttccagg
tggtatcagcttctctcatctattgttacccgtcaaaggctgaacaactgttacggggat
cattcaacttcacaaacctcaaacaacattgaaaatacaaaagaaaaagttagtgaaggg
gttggtggtagtgaggataatggaagatctcatgaatgtgagggacagacattgcccaga
aaatcggaatttgtgtcaatggtaaccacagaagaacatgagcatgtgtttttgacagat
gatcacgatgttgatgaacagagttttatgaggacaaagcgatgtcgttgtggattttcg
attcaagtggaggagttttag

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