Rhododendron vialii: 131304111
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Entry
131304111 CDS
T09330
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
rvl
Rhododendron vialii
Pathway
rvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131304111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131304111
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
131304111
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
131304111
NCBI-ProteinID:
XP_058187200
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Position
10a:37243721..37254292
Genome browser
AA seq
1179 aa
AA seq
DB search
MGGIKHLPEAVHSSVRSGIILFDFARVVEELIFNSLDAGATKIFVFQISVAVGVGTCYVK
VVDNGVGITRDGLVLLGERYATSKFDQLTETNAVTRSFGFRGEALSSISDVSLLEVITKA
HGRPNGYRKVVKGCKCLYLEIDDGRQDVGTTVIVRDLFYNQPVRRRHIKSSTKKVLQSVK
NCALRIALIHPKVLFKVVDTESDDVLFSTAPSSSTLSLLTSGFGIELSSSLHELSVSDGV
LKLLGYMSTPCDTSSAKVFQYVYINSRYICKGPIHKLLNQLATRFNYLDQQQDKIGTHNA
KRSRSQTSATYILNLICPRSWYDITFEPSNTSVEFKDWFPLIGFIEKSVTRFWSEKLSYG
YSLGHVSEEDNVRRDTDKTLSLEEDLPMKYEIPKRRREMQPEESDIMYYPKGNRFTHCNA
SEFEEQQTGLGFDCEVDFSFQSCDGSQAPDTNVFSTKDHFMQNEIFAAEKSKDNTDFILD
YSLENGHLNMAGDKSNGYTGSALSFDSSEICNEVDNFSNYFTKPFLRHCSTWKTPDRESL
VSSEGFDFQMDGFRTKRKRLERNLVDVGEMDDIDQRFAFGQRNQWLDEVADVSHFGSSDR
PFDSEHSPVMSDSSFLTKSLGVEKFFGENALESCVKYDIGSRYDTLEDWEIRDHSFRFND
TIQNSSTHGNCSPSRWTNMCSDSKSCESFSGDSLGICQQHKPYDAVYPEDLDVLSDDREW
LCLDSHGKHNGNLHATSRRFSSAINRDKVENQKDQLTYHEKEYVCKKRPRRSHSAPPFYR
DKKKFIALNDHLVMSDGKTKIHPASDDVPTSEETTELMYSQRSAGVCKLHSEPSSVEDQL
IYTRPEKKAVDMSDFQDFTMEKKSEDHIDSMNSGEDIQDPSDSGIKWRKCCPSTAQHAGK
LRCAHNEDTVLDVSSGILHLAGDSLVPESINKNFLVDAQVLQQVDKKFIPVVGSGVLAII
DQHAADERIRLEELRQKVLSEGKKTVTYLDSEQKLVLPEIEYQLLHTYAEQIQSWGWLCN
IHARGSKSFKKNLNLLRKQPTVVTLVAVPCILGVNLTDVDLLEFLQQLAETDGSSTIPPS
VHRVLNFKACRGAIMFGDTLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ
IAKLGSWSGGSNGSWHGLRQHQLSLERASHRLSSAIGNG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggggcattaagcacttgcctgaggctgttcatagttccgttcgatcgggtattatc
ttgttcgactttgctagagttgtggaagagctgattttcaacagtcttgatgctggtgca
accaagatatttgtctttcagatatctgttgcagtcggtgttggaacatgctatgttaaa
gtagtggacaatggtgttggtattactcgcgatggattggtgttgttgggagaaagatat
gcaacgtccaagtttgatcagctgactgaaaccaatgctgttaccagaagctttggcttt
cgcggagaagcactaagctccatttctgatgtttcattgttagaagtcattacaaaagct
catgggaggccaaatggatatcgcaaggtcgtgaagggatgcaagtgcttgtatcttgag
attgatgacggtaggcaagatgtaggcaccacagtcattgttcgggatttattttacaat
caaccagttcggaggaggcatattaaatcgagcacaaagaaagtcttgcaatcagtcaag
aactgcgctcttagaattgccctcattcatccgaaagttctcttcaaagttgttgatact
gagagtgatgatgtgttgttctccacggccccatcctcgtctactttgtcactattgacg
agtggttttggtattgagctttccagttctctccatgaactgagtgtctctgatggtgta
ttaaagcttcttggatacatgtcgactccttgtgatacttcatctgctaaggtctttcaa
tatgtctatatcaactctcggtatatatgcaaaggcccaatacataaactgctaaatcag
ttggctacaaggttcaactatttggatcagcagcaggacaaaattgggacccataatgcg
aagcgaagtaggtctcaaacttccgcaacctatattttgaacttgatttgcccaagatct
tggtacgatattacttttgagccatcaaatacgtctgttgaattcaaggattggtttcca
ctaattggttttattgaaaagagcgtgacacgcttttggagtgaaaagttatcttacgga
tactctctcggtcacgtttcagaagaggataatgtgcggagagacactgacaagacatta
tcactagaagaagatttgcctatgaaatatgaaattccaaaaaggaggcgggagatgcaa
cctgaagagagtgacataatgtactatccgaaaggcaatagatttactcattgtaatgct
tcagaatttgaagaacaacagactgggttaggatttgattgtgaagttgacttctcattc
cagtcatgtgatggatcgcaggcacctgatactaatgtcttttctaccaaagaccatttc
atgcagaatgaaatatttgccgcagaaaaatcaaaagacaatacagacttcattttagat
tatagtttggagaatgggcatctcaatatggctggcgacaagagcaatggttatacaggg
agtgcattatctttcgattcttccgaaatttgcaatgaggtggacaatttcagcaactat
tttacaaaaccctttttgcggcattgctccacttggaaaacccctgatagagaatcgttg
gttagttctgaaggatttgactttcagatggatggctttaggaccaaacgaaagcggctt
gaacgtaacctggttgatgttggagaaatggatgacattgaccagaggtttgcctttggt
caaaggaatcaatggcttgatgaggttgcagatgttagtcattttggctcttccgatcgt
ccttttgattctgaacattctcctgttatgtcagattcatcttttctgaccaaatcgctt
ggtgtagagaaattctttggtgagaatgctcttgaaagttgcgttaaatatgatattggc
tctagatacgacactctggaagactgggaaattagggaccatagtttccgtttcaatgat
actattcaaaatagctcaacccatggaaactgctccccatcaaggtggacaaacatgtgc
tcagattccaaaagttgtgaaagtttctcaggagacagtcttggaatttgccaacaacac
aaaccatatgatgctgtttatcctgaagatttggatgtgttaagtgatgacagagagtgg
ttatgtttagactcacatggtaaacataatggtaacttgcatgcgacgtcacgccgcttt
tcttcagcaattaacagggacaaggttgaaaaccaaaaagatcagctgacatatcatgag
aaagagtatgtttgtaagaaaaggccaagaagaagccattcagctccgccattctacaga
gacaagaaaaaattcattgctttgaatgatcatttggtcatgtcagatgggaaaacaaaa
atccaccccgccagtgatgacgtccctacttcagaagaaactactgagttgatgtattca
cagagatcagccggtgtatgtaaactacactctgagccaagttctgtggaggaccaattg
atctatacccgaccagagaagaaagcggtggacatgagtgactttcaagattttacaatg
gaaaagaagtcagaggaccacattgacagtatgaattcaggtgaagacattcaagatcct
tcagattctgggataaaatggcggaagtgctgtcccagcactgcacagcatgcaggaaaa
ttacgttgtgctcacaatgaggatactgtgcttgatgtctcttctggcatcttgcaccta
gctggtgattcattggttcctgaatccatcaataagaattttttggtagacgctcaagtt
cttcaacaggtggataagaaattcattccagtggtcggtagtggagtacttgcgattatc
gaccagcatgctgcagatgaaaggatccgcctggaagaattgcgtcaaaaggtgttatcc
gaaggaaagaagacagtcacctatttggacagtgagcaaaagttggtcctgcctgaaatt
gagtaccagttattacacacttatgctgaacagattcaaagctggggttggctctgcaat
attcatgctcggggctcaaagtcttttaaaaagaatttgaatcttctacgcaagcagcca
actgttgtcacacttgttgcggttccatgcatacttggagtcaatttgacggatgtagat
ctcttagaatttcttcaacagcttgctgaaacagatggatcatccacaataccaccatct
gtccatcgggtccttaattttaaagcttgtagaggcgcaatcatgtttggggacacgttg
ctaccttcagagtgttccctgattgttgaagagctgaagcagacctcattgtgtttccaa
tgtgctcatgggcgaccaacaaccgtgcctcttgtcaacttggaagcattgcataagcag
atagcaaagcttggatcatggagtggtggctcaaatggatcgtggcacggtttacgtcaa
catcaactcagtttagaacgtgcatcccaccgtttaagctcggctattggcaatggttga
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