Rhododendron vialii: 131304187
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Entry
131304187 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131304187
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131304187
Enzymes [BR:
rvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
131304187
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131304187
Prokaryotic type
131304187
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SGS
Motif
Other DBs
NCBI-GeneID:
131304187
NCBI-ProteinID:
XP_058187310
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All DBs
Position
10a:complement(1610335..1615739)
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AA seq
548 aa
AA seq
DB search
MNSLRSSHIPLLFLRHKPLSLYPTTLSLLLRHSKPNKPFSFLKPSSHPFSTTLTQYPLQY
DMIISRPDTHSHPHSPRRRSLPREIPQSSPADPPESEPEPELGFDDWVDRKLTSPSSEPE
RELRPILGDPELDKSKRKYYNKRRRRMYGSDSEDERRRRDNDGYVELKPEVVEFRTLHKR
EEELYFYDTFAYPWEKEKHYKMVYQLEKKYFPDQCFDKAFLDPSQMNVKAKAERDKKGGG
SKRGERREKGGDGRDEKGLVFFEEGEEGKEEKEKGLVKDVKIDVSEKKVEEFFKCLKKVP
DKDSEVANAEPFVSARSIGLPTKWDSPTGNVVLVNKPKGWTSFTVCGKLRRLVNVKKVGH
AGTLDPMATGLLIVCVGKATKVVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEH
IKDDDIKKAAASFCGEIWQVPPMFSAIKVGGERVYEKARRGESIELSPRRISIFQFEIER
SLDDRQNLIFRVVCSKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWDFKELE
EAITKNYL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaactccctacgttcatcccacatccctctcctcttcctccgccataaacccctctct
ctctaccccacgactctctctctcctcctccgccattccaaacccaacaaacccttctcc
ttcctcaaaccctcttcccaccccttctccaccactctaacccagtacccacttcaatac
gacatgatcatctctcgcccagatactcactcccatccccattccccccgccgccgcagt
ctcccgcgagaaatccctcagtccagccccgccgacccgcccgaatccgagccggagccg
gaactgggttttgacgactgggttgatcggaaattaacatcaccttcatcggaacccgaa
agagaactccgacccattttgggggatccagaattggataagtccaagaggaagtattat
aacaagaggcgaaggagaatgtatgggtcagactctgaagatgagaggaggcgtcgagat
aatgatgggtatgttgaattgaagccggaagtggtggagtttcgcacattgcacaagaga
gaagaggagttgtatttttatgacacgtttgcgtatccgtgggagaaggagaagcattac
aagatggtgtatcagttggagaagaagtattttcctgatcagtgtttcgataaggcgttt
cttgatcccagtcaaatgaacgtaaaggcgaaggcggagagggataagaaaggagggggt
agtaagagaggagagaggagagagaagggtggggatggaagggatgagaaggggctggtt
ttctttgaggagggggaggagggaaaggaggagaaagagaaagggttggtgaaggatgtg
aaaatcgatgtttcggagaagaaagtggaggagttctttaagtgtttgaagaaagtcccc
gataaggatagtgaagttgctaatgcagagccgtttgtttccgcaaggagtattgggtta
cccacaaaatgggatagccctactgggaatgttgtcctagtgaataaacccaaaggatgg
acttcatttacagtttgtggaaagctgcgtaggctcgtcaatgtgaaaaaggtaggccat
gctggaactcttgatcctatggcaactggtttattgattgtatgtgttggtaaagctacc
aaggtggttgataggtatcaaggtatgatcaagggttatagtggagtcttccgtttaggg
gaggctacctcaacgtgggatgctgattcaccggttatccaacgtgagccatgggaacac
ataaaagatgatgatataaagaaagctgctgcatctttttgcggggagatatggcaagtt
cctccaatgttttccgcaatcaaagttgggggtgagagggtgtatgaaaaggccagaaga
ggagaaagcattgaactttcgcctaggaggatttcaattttccagtttgagattgagcga
agtttagatgacagacaaaatttgattttccgggtggtatgctcaaagggtacatacatt
cgatcgctttgtgcggaccttgggaaggctctgggcagttgtgctcatttaacggcgttg
agaagagattcaattgggcaatattcagctgatgatgcctgggatttcaaggaattagaa
gaagcaatcaccaaaaattatctataa
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