KEGG   Rhododendron vialii: 131304202
Entry
131304202         CDS       T09330                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A isoform X1
  KO
K14963  COMPASS component SWD3
Organism
rvl  Rhododendron vialii
Pathway
rvl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    131304202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rvl03036]
    131304202
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     131304202
    NSL complex
     131304202
   HMT complexes
    COMPASS/SET1 complex
     131304202
    COMPASS/SET1 complex (yeast)
     131304202
    MLL-HCF complex
     131304202
    MLL3/MLL4 complex
     131304202
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131304202
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C eIF2A Beta-prop_HPS5 WD40_like Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st RMC1_N Beta-prop_Vps41 Beta-prop_DCAF12 Ge1_WD40 WD_LRWD1 VPS8_N Beta-prop_WDR75_2nd Cytochrom_D1 PALB2_WD40 Beta-prop_VPS8 Nucleoporin_N DUF5888 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 131304202
NCBI-ProteinID: XP_058187331
LinkDB
Position
10a:10833315..10838749
AA seq 315 aa
MASSDSSEPIKPYNLQQTLSGHKRAISSVKFSPDGRLLATSSADKTALIHSTTSSSSSSP
SLLQGHDEGLSDAAFSSDSRYLATASDDKTVRIWDLSTASLVKTLTGHTNYVFCVNYNPQ
SNMIVSGSFDETVRVWDVKTGKCLKVLPAHSDPVTAVSFNREGTLICSSSYDGLCRIWDA
STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKY
CISSTFSVTNGKYIVSGSEDNCVYLWELQTRKIVQKLEGHTDTVISVSCHPTENKIASGA
LGNDKTVKIWSQDED
NT seq 948 nt   +upstreamnt  +downstreamnt
atggcctcctcagactcatccgaaccaatcaaaccctacaacctccaacaaaccctttcc
ggccacaagcgcgccatctccagcgtcaaattctcccccgacggccgcctcctcgccacc
tcctcagccgacaaaaccgccctcatccattccaccacctcttcctcctcctcctccccc
tccctcctccagggccacgacgaaggcctctccgacgcggccttctcctccgactcccgc
tacctcgccaccgcctccgacgacaagaccgtccgcatctgggacctgtccaccgcctcc
ctcgtcaaaaccctaaccgggcacaccaactacgtcttctgcgtcaactacaacccccag
tccaacatgatcgtgtccggctccttcgacgagacggttagggtttgggacgtgaagacg
gggaagtgcctcaaggtgctcccagcgcactcggacccggtcaccgcggtgagctttaat
cgggaggggacgctgatttgctcaagcagttacgatgggttgtgtaggatttgggacgcg
tcgacggggcattgtatgaaaacgctgattgatgatgagaatccgcccgtgagctttgtc
aagttctcgcccaatgggaagtttattcttgttgggactttggataatactctgaggctt
tggaacttctcaactggtaaatttctgaagacctacactggtcatgtgaactcaaagtac
tgcatttcgtcaacattttctgtgacgaacggcaagtatatcgttagcggttctgaggat
aattgtgtatatctgtgggaacttcagacacggaaaatagttcagaaattggaaggtcac
actgacactgtcatatcagtttcatgtcaccccaccgagaacaagattgcttctggtgcc
cttggaaacgacaaaactgtgaagatctggtctcaagatgaagactga

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