Rhododendron vialii: 131304220
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Entry
131304220 CDS
T09330
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvl03000
]
131304220
03036 Chromosome and associated proteins [BR:
rvl03036
]
131304220
Transcription factors [BR:
rvl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
131304220
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
131304220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
CHDNT
Motif
Other DBs
NCBI-GeneID:
131304220
NCBI-ProteinID:
XP_058187352
LinkDB
All DBs
Position
10a:complement(3287265..3294574)
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AA seq
643 aa
AA seq
DB search
MSDGHLFNSISLGGRGGTNPGQLRVHSGGISWKKQGGGKAVEVDNSDVVALTWMKVPRSN
QLGVKIKDGLNYKFTGFRDQDVASLTTFFQSTFEITPEEKQLSVSGRNWGEVDLNGNMLT
FLVGSKQAFEVSLADVAQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIVSMADVGAGGEESVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVESTLSMN
EDLLNAKYKDKLEPTYKGLIHEVFILILRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RSEYHNLFDFISGKGMKIMNLGDARTAEGVAAVLQNDDDDAVDPHLERIRNEAGGDESDE
EDEDFVVDKDDSGSPTDDSGGEDSDANDSGDENEPAKKESKKEPSTSKASSSRVKSKVGG
EDGPKKKKQKKKKDPNAPKKAMSGFMFFSQSERENIKKTNPGIAFTDIARVLGERWKKMT
AEEKEPYEAKARADKKRYADQVSGYKNPPQPMNIDSGNESDSA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggtcacctcttcaacagcatctctctcggcggccgcggtggcactaatcct
gggcaacttagggttcactcagggggtatatcgtggaaaaaacaagggggtgggaaagct
gtggaagttgataattccgatgtcgtagctctaacctggatgaaggtgccccgcagtaat
caacttggggttaaaattaaggacggtttgaactacaaattcactggtttccgtgaccag
gatgtggctagcctcaccactttttttcaaagcacttttgagataacaccagaagagaag
cagctttctgtcagtggaagaaactggggtgaagtcgatttaaatgggaatatgctgact
tttctggttggttccaagcaagcatttgaggtatctttagcagatgttgcccagacacaa
cttcagggaaaaaatgacgtcattttggagttccacgtggatgacacaactggtgctaat
gagaaggattcgttgatggagataagttttcacataccaaattccaacacacagttcgtt
ggtgatgaaaatcgtcctcctgctcaggttttccgtgacaaaatcgtgtcaatggcagat
gttggggcaggaggtgaagaatctgttgttacatttgaagggattgcgattcttactcca
aggggccggtataatgttgaacttcatctttcatttttgaggctacaagggcaagctaat
gattttaaaattcagtacagcagtgttgttcgcctgtttctactacccaagtctaaccaa
ccacatacctttgttgttgtcactcttgatccaccaattcgtaaaggccaaactttatac
ccgcatattgtgttgcagtttgaaacagattatgtggttgaaagcacactgtcaatgaat
gaagatcttttgaatgcaaaatacaaggacaagttagaaccaacgtataagggcctcatt
catgaagtgttcatattgatattgcgcggattgtctggtgccaaagtaaccagaccagga
aaattccgtagctgtcaagatggttatgctgtgaagtcttcgttgaaagctgaagatggt
gtcctatatccacttgaaaagggcttcttctttttacccaagcctccaactcttattctt
catgaagagattgactatgtggagtttgagaggcatgctgctggaggctcaaatatgcat
tactttgatcttcttatcagattaaagactgagcaggaacatctcttccggaacatccag
aggagtgaatatcacaatctttttgacttcatcagcgggaaaggtatgaaaatcatgaac
ttgggagatgcccgtactgcagaaggtgttgcagctgttttgcaaaatgatgatgatgat
gctgttgatccacatcttgagcggattaggaatgaagctggtggagacgagagtgatgag
gaggatgaggactttgttgttgataaggatgattcaggctcaccaacagatgattctggt
ggagaggattctgatgctaatgacagcggagacgagaacgagcctgctaaaaaggaatcg
aagaaagaaccctctacttctaaggcatcctccagtagggtgaagtctaaagtcggtggt
gaggatggacctaagaagaagaagcagaaaaagaagaaggatccaaacgcaccaaagaag
gccatgtctggttttatgtttttctctcagagtgaaagggagaatattaagaaaacaaat
cctggaattgcattcactgatattgcgagagttcttggagagagatggaaaaaaatgaca
gctgaggagaaagaaccatacgaagccaaggctcgcgctgacaaaaaacgttacgctgat
caggtctccggttacaagaaccctcctcagccaatgaacatagattctggaaatgaatct
gacagtgcatag
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