Rhododendron vialii: 131304322
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Entry
131304322 CDS
T09330
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131304322
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
131304322
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
131304322
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
PTP2
CX9C
Motif
Other DBs
NCBI-GeneID:
131304322
NCBI-ProteinID:
XP_058187511
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Position
10a:complement(39106691..39114541)
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AA seq
629 aa
AA seq
DB search
MKIVTYNVNGLRPRVSQFGSLLKLLDSLDADIICLQETKISRQDLTADLLVADGYECFFS
CTRTTDKGRISYSGVATFCRVKSAFSSNEVALPLAAEEGFTGVLESSKGLRRREDEGPAK
AGGLEEFSKEELLKIDSEGRCVITDHGHFGNLTVLFNIYGPRAVSDDRERIQFKHTFFMM
LQKRWSFLLHQGRRIFIVGDLNIAPAAMDSCNPGPDFDKNHALPCRFRRWFRSLLVENGG
DFFDVFRAKHPERTEAFTHWPQNTGAEEFNYGSRIDHILSGGVCLHEDSGQKGHNFVTCH
VKECDIMSQFKRWRPGNSPRWKAGRSIKLEGSDHVPVYTSLMEIPDIAQHSTPSLSARFV
PEVRGVQQTIVSMMMKRQVEKQVKTDEVSSSFSEENMTVGTCIENLERSSYDFNTSGSPS
ERSCDASGGSFSETAHAKMSAFETVRANSTPGKEIRKKARHGQSSQQLSLKSFFKKSLTS
AFGHDHTSTAINNELGDVAKSDNTPVEPTMDEQESCRPEQSQLNDCISTQDQGDLNACCS
SEADKSNVALSEWQRIRQLMQNSMPFCKGHHEHCVSRVVKKEGPNFGRRFYVCARAEVKV
FLMRCQPPHLLPFWTPNLPYLLLNAVLVS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacgtacaacgtcaacggcctcaggcctcgggtctcgcagttcggttct
ctcctcaaattactcgactctctcgatgccgatatcatctgtttacaggagaccaagata
tctagacaggacctaacggcggatttgcttgtggccgacggctatgagtgcttcttttcc
tgcacccgcaccaccgataaaggacgcatcagctactccggcgttgcaacattttgtcgc
gtaaagtcagcattttcaagcaatgaagtggctttaccccttgcagccgaggagggcttt
actggggttcttgaaagttcaaaagggttgagaaggagagaagatgaaggaccggcaaaa
gcagggggccttgaggaattctcaaaggaagagcttcttaagattgatagtgaggggcga
tgtgtcataacagaccatggccattttgggaatttgacagtgctttttaacatctatgga
ccacgagcagtctctgatgatagggagaggattcagtttaagcacaccttttttatgatg
ttacagaaaagatggagttttcttttgcatcaaggacgaagaatattcatagttggtgat
cttaatattgctcctgctgctatggatagctgtaatccggggccagactttgataagaac
catgcactgccttgcaggttcaggaggtggtttagatccttacttgttgaaaatggtggc
gatttctttgatgttttcagagcaaagcatcctgagaggacggaagcattcactcactgg
ccgcagaacacgggggctgaagaattcaattatgggtctaggatagaccatattctcagt
ggtggagtatgtttacatgaagatagtggacagaaaggccataattttgtgacttgccat
gtgaaagagtgtgacataatgagccaattcaaacgatggaggcctgggaattcacctagg
tggaaggccgggagaagcatcaaattggaaggttctgatcatgtccctgtttatacaagt
ttgatggaaatcccagatattgcgcagcatagtactccctctttatctgctagatttgtt
cccgaggttcgtggcgtccagcagactattgtgtcaatgatgatgaaaagacaagtagag
aagcaagttaagaccgacgaagtgtcaagttcattttcagaggaaaatatgacagttggg
acttgcattgagaatttggaaagatcatcttatgacttcaatacatcaggctcgccctct
gaaagaagttgtgatgcttctggaggttcctttagtgagactgcccatgctaaaatgtct
gcatttgaaactgtccgtgctaactcaacccctggtaaagaaatcaggaaaaaagcaaga
cacggtcaatcgtcacaacaactctcactgaagtcattttttaagaaaagtttgacatct
gcttttgggcatgaccacactagcactgcgatcaacaatgagctgggagatgtggcaaaa
tctgacaatacaccagttgaacctaccatggatgagcaggagagctgtcgtcctgagcag
tcccagttaaatgattgtatatccactcaggatcaaggtgatctaaatgcctgttgttct
tctgaggcggacaagagtaatgttgcgttatcagagtggcaaaggattcggcaactgatg
cagaacagcatgcctttttgcaagggccatcatgaacattgtgtttctcgggttgtgaag
aaagaaggccctaattttggccgcagattctatgtctgtgctcgtgctgaggttaaggtt
tttctcatgagatgtcagccaccccatttgctgcctttttggaccccaaacctcccctat
ttgttgctgaatgcagttcttgtaagttaa
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