Rhododendron vialii: 131304514
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Entry
131304514 CDS
T09330
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131304514
Enzymes [BR:
rvl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
131304514
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131304514
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
CinA
Motif
Other DBs
NCBI-GeneID:
131304514
NCBI-ProteinID:
XP_058187744
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Position
10a:6140984..6149084
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AA seq
646 aa
AA seq
DB search
MAATALSKRKEAKSQKPPPRKKQRNEPPPRKKQKNESFPAKNPMNLISDSDDMDEMVEEH
GQLHEDQQGSDSGSEMSSDGDDPLVDDFLLGSVDGNSDGEKGSDLDSDSDESDIEVKARA
DEEEKVREEEDALEELKLNIKEEPDEFRLPTKEELEEEANRPPDLQSLQRRIKEIVRVLS
NFKSLRQEGATRKDYVEQLTMDLGSYYGYNEFLIGALAEMFPVNELMELIEAFEKPRPIC
LRTNTLKARRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQSA
SSFLPVMALAPQEKERIVDMAAAPGGKTTYISAIMKNSGIVYANEMKESRLKSLTANLQR
MGVTNTLVCNYDGRELPKALGQNTVDRVLLDAPCSGTGVISKDESVKTSKTLEDIHKCAH
LQKELLLAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALRKRDVKLVPCGLDFGRP
GFVRFRENRFHPSLEKARRFYPHVQNMDGFFVAKLKKMSNSKLTPTAPEPSATVEQGSEL
IDSIDINSDEGEFQRHSSKESITTERTKITITRSKESNMKKSREIGKLQNGFPEKGKHVP
KYTAGFWKERKQQRLSREEIAKSREEKRQALREDKKKAEGKKRAAK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgcattaagcaagagaaaggaagcaaagtcacaaaaacctccacctaga
aagaagcaaaggaatgaacctccacctagaaagaagcaaaaaaatgaatctttccccgcc
aaaaatccaatgaatcttattagtgattctgatgacatggatgaaatggttgaagaacat
ggccaattgcatgaagaccaacaaggaagcgattcaggttctgagatgtcttctgatggg
gatgatccgttggtcgatgattttctcctaggaagtgtcgacggaaatagtgatggagag
aaaggttctgatttggattctgattctgatgagtctgacattgaggtaaaggcaagagct
gatgaagaagaaaaggtgagagaagaagaagatgcactggaagagttgaaactgaacatt
aaagaagaaccggatgaattcagattgccaacgaaggaggaacttgaagaagaggcaaat
cgccctcctgatctccaaagtctccaaaggaggataaaagaaattgttcgggtgctttca
aatttcaagtctctaaggcaagagggggcaacacgaaaggattatgtcgagcagcttaca
atggatttaggttcatactatggctacaatgagttcctgattggggcgttggcggagatg
tttccagttaacgaacttatggaacttattgaagcttttgagaagcctcgtccaatatgt
ctcagaaccaacaccttaaaggctcgcagaagggatttggctggtgttctgttgaacaga
ggtgtaaacttggatccattaagcaaatggtcaaaagtaggactggttgtttatgattct
caagttcctattggtgccacacctgaatatatggccggttattacatgttgcaaagcgct
agctcattcttgcctgtgatggctcttgctcctcaagagaaggaaaggattgttgatatg
gccgctgctcctgggggtaaaacgacctacatttctgctattatgaaaaacagtggtata
gtttatgcaaatgaaatgaaagaatcaagactcaagtcacttactgcaaatttgcagcga
atgggtgtgacaaacaccttagtttgcaactatgatggaagagagctgcccaaggctttg
ggtcagaacacagttgatagggttttgttagatgccccatgtagcggaactggggttata
tctaaagatgagtctgtcaaaacctctaaaaccttggaggacatacacaagtgtgcccat
ttgcagaaggagctgctgcttgctgccatcgacatggtggatgccaactcaaaatctggg
ggatacattgtttactccacgtgctcaataatgattcctgagaacgaagcagtcatagat
tatgctctcaggaagagggacgtaaaactcgtgccgtgtggccttgactttggacgccca
gggtttgttcgctttagagaaaaccgttttcatccttccttagagaaggcgcgacgtttc
tatccccatgtacagaacatggatggtttttttgtggctaagttgaagaaaatgagcaat
tccaagctgactccaacggctcctgaaccatcagcaacagtagaacaaggttccgagcta
attgatagcattgacattaattctgatgaaggagaatttcaaaggcattcgagtaaagaa
agcattacaacagaaaggacgaaaatcaccataacaagaagtaaagaaagcaatatgaag
aagagtagagaaatcgggaaattgcagaatggttttccagaaaaggggaagcacgtgccc
aaatacactgctggattttggaaggaaaggaaacagcaacgcctttctagagaggaaatt
gcaaaatctagggaggagaagaggcaagctttgagggaagacaagaaaaaagctgagggg
aaaaagagggctgcaaagtag
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