Rhododendron vialii: 131304628
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Entry
131304628 CDS
T09330
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
rvl
Rhododendron vialii
Pathway
rvl03420
Nucleotide excision repair
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131304628
09124 Replication and repair
03420 Nucleotide excision repair
131304628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rvl03051
]
131304628
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131304628
Proteasome [BR:
rvl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
131304628
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
131304628
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
Rad60-SLD_2
Dsc3_N
UBA_RAD5A
UBA_3
Ubiquitin_4
Crinkler
Ubiquitin_2
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
131304628
NCBI-ProteinID:
XP_058187931
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Position
10a:complement(7868869..7878378)
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AA seq
382 aa
AA seq
DB search
MKIFIKTLKGTQFEIEVNPEDTVADVKKSIETVQGSDVYPAAQQLLIHQGKVLKDATTLD
ENKVAENSFVVIMLSKNKPSGGASTTSSAPSIQAQPASSVAPLTQQVTESPAPASTAGIP
QAAPESTPAAPAPAALTFRSESAVYDQAASNLVAGGNLEASIQQLLDMGGGSWDRDTVVR
ALRAAYNNPERAVDYLYSGIPQQAEPPVAQAPAIGQAVNPLAQAPQPAVPSSGPNANPLD
LFPQGIPNVGSNASAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQ
EHQADFLNLINEPVEGEGNVLEQLAGAMPQTVAVTPEEREAIERLEAMGFDRALVLEVFF
ACNKNEELAANYLLDHMHEFDD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcatcaagacactcaagggcacgcaattcgagatcgaagtgaaccccgaa
gacaccgttgctgatgtgaagaaaagtattgaaacagttcagggttcagatgtttaccct
gctgcacaacagttgcttattcatcaggggaaagttctcaaggatgcgacaacattggac
gaaaacaaagttgcggaaaacagtttcgttgtcatcatgttaagtaagaacaagccttca
ggtggggcctcaactacatcatctgcaccttcaattcaggcccaacctgcaagttccgtg
gctcctctaacacagcaagtaacagagtctccagctcctgcatcaactgcagggattcca
caggctgcccctgaatccacgcccgctgctcctgctcctgctgctcttaccttcaggtca
gaatcagctgtttatgaccaagctgcatcaaatcttgttgctggtggtaacttagaggct
tctattcaacaacttcttgatatgggcggtgggagttgggaccgggatacggttgtccgt
gctctacgtgctgcatacaacaacccagagagagctgttgactacctctattcaggtatt
cctcagcaagctgaaccaccagtggctcaagctcctgctattgggcaggctgtgaaccct
ctagcccaagctccacagccagcagttccttccagtggccccaacgcaaatccacttgat
ctttttccgcagggcattccaaatgttggttcaaatgcaagtgctggcaccttagatttt
ctgcgcaacagtcaacagttccaagccttgcgtgccatggttcaagccaatcctcaaatc
ttgcagcctatgcttcaggagctgggaaagcaaaatccgcacttgatgcggctaattcag
gagcatcaagcagactttctaaacttgatcaatgaacccgttgaaggggagggcaatgta
ttggagcagcttgcaggagcgatgccacagactgtggctgtcacacctgaagagcgcgag
gcaatagaacgtcttgaagcgatgggctttgatcgagctttagtgttggaggtatttttt
gcgtgcaacaaaaatgaggagcttgcagcaaactatcttttagatcacatgcatgagttt
gatgactga
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