Rhododendron vialii: 131304686
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Entry
131304686 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131304686
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131304686
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Helicases
131304686
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Trypan_PARP
KRAP_IP3R_bind
Motif
Other DBs
NCBI-GeneID:
131304686
NCBI-ProteinID:
XP_058188003
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All DBs
Position
10a:complement(12063646..12073425)
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AA seq
618 aa
AA seq
DB search
MAKATKMLPHVNEDHEKEPEPEPEQEPEPVPEHEQEEEEDQTFEELGLDPRLIRALTKKS
IDNPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYVLPLLHKLFSDSGSKNRLAPAAFVL
VPTRELSQQVYSEIQSLIELCRVQLKITQLTSAMFDADLKTALAGPPDILVSTPACLQSC
FSKGVLLPASVQDSLSFLVLDEADLLLSYGYEDDIKSLTAHIPRRCQCLLMSATSSADVE
KLKKLILHNPFILTLPEVGDTKDEIIPKNVQQFWISCSARDKIIYILALMKLELVQKKVL
IFTNTIDASFRLKLFFEKFGIKSAVLNAELPQNSRLHILEQFNAGLFDYLIATDDSQLKE
KEQADGESRVERKRSRKHARKKMDSEFGVVRGIDFKNVNTVINFDMPHSAEGYVHRIGRT
GRAYSTGASVSLVSPEEMEIFEEVKSTLGENENKDSNFIAPFPLLTKNAVESLRYRAEDV
ARSVTKISVREARAQDLRNEILNSEKLKAHFQVNPKDLDLLKHDKVLSKKPLSTHLRDVP
EYLLDPTTQEASKIVKLARAAMGNNSACRKGFKGKSRKDKDPLKSLSAGASKGGFKGGMK
RKGKEKDDSSRNRKKQSV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcaacgaaaatgcttcctcacgtgaacgaagaccacgagaaggagccagag
cccgaaccagaacaggaacccgaaccagtaccggaacacgaacaggaagaagaagaagac
cagaccttcgaagagctcggactggaccctcgattgatccgtgccctaaccaagaaatcc
atcgacaatcccacccccatccagcgcgtcgcaataccactcatcctggaaggcaaggac
gtggttgctagggcaaagaccggttcagggaagacctttgcttacgtcctcccgttgctt
cacaagctcttctccgattccggttcgaagaataggctcgctcccgcagcattcgttctc
gtcccaacccgagaattgtctcaacaggtttattcagagatacagtcgctgatcgagtta
tgtagagtgcagttgaaaattactcagttgacgagcgctatgttcgatgctgacttgaaa
acagctttggcaggaccgcctgatattctggtttcaaccccagcttgcctgcaatcgtgc
ttttcaaaaggtgtactcctcccagcatctgttcaggattcgctctcatttcttgttctt
gatgaggctgatcttcttttgtcatatgggtatgaagacgatataaaatctcttaccgct
catatccctagacgatgtcaatgtcttctcatgtctgctacgtcaagtgctgacgttgaa
aagctcaaaaagcttattcttcacaatccgtttatcttaactttgccggaggttggagat
acgaaggatgagattatccctaaaaatgttcaacaattttggatttcgtgcagtgctcgt
gataagattatctacatccttgccctcatgaagttggagctcgtccagaaaaaagtgctc
atatttactaatacgatcgacgcgagttttagactgaaactcttctttgaaaagtttgga
atcaagtcggctgttttaaatgctgagctgccacagaattctcgtttacatatcctcgag
caattcaatgccggcctttttgactatttgatagcaacggatgacagccaattaaaggag
aaagaacaagctgatggggagagccgtgttgagagaaaaagatcgagaaagcatgccagg
aaaaagatggactctgaatttggagtagtgagaggaattgacttcaaaaacgtcaacact
gttataaatttcgatatgcctcatagtgctgaaggatatgtacatcgcattggacgtact
gggagagcctatagtactggtgcgtctgtctctctggtttctcctgaggagatggaaata
tttgaagaagttaaatccactttgggtgaaaatgaaaacaaggactcaaactttatcgcc
ccatttcctttactcacaaaaaatgcagtggagtctttgcgatatagagctgaggatgtt
gcaaggagcgtgacaaaaatttctgtgagagaagcacgagctcaggatctgaggaacgaa
attctcaattctgaaaagttgaaagctcattttcaagttaatccaaaggatttagatctc
ctgaaacatgacaaggtcctgagcaagaagcccctctcgacgcacctacgcgatgtgcct
gagtacctattggatccaaccacacaggaagcaagcaagattgtcaagctggctagagct
gccatgggaaacaactctgcttgccgtaagggattcaagggaaaatccaggaaggacaaa
gaccctctaaaatctctctctgctggggcttcaaagggaggatttaaaggcgggatgaaa
aggaagggaaaggagaaggatgatagcagcagaaatagaaagaaacaatctgtatga
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